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来自患者痰液的结核分枝杆菌转录谱分析

Transcriptional Profiling Mycobacterium tuberculosis from Patient Sputa.

作者信息

Wildner Leticia Muraro, Gould Katherine A, Waddell Simon J

机构信息

Universidade Federal de Santa Catarina, Florianópolis, Santa Catarina, Brazil.

Department of Global Health and Infection, Brighton and Sussex Medical School, University of Sussex, Brighton, UK.

出版信息

Methods Mol Biol. 2018;1736:117-128. doi: 10.1007/978-1-4939-7638-6_11.

DOI:10.1007/978-1-4939-7638-6_11
PMID:29322464
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7000237/
Abstract

The emergence of drug resistance threatens to destroy tuberculosis control programs worldwide, with resistance to all first-line drugs and most second-line drugs detected. Drug tolerance (or phenotypic drug resistance) is also likely to be clinically relevant over the 6-month long standard treatment for drug-sensitive tuberculosis. Transcriptional profiling the response of Mycobacterium tuberculosis to antimicrobial drugs offers a novel interpretation of drug efficacy and mycobacterial drug-susceptibility that likely varies in dynamic microenvironments, such as the lung. This chapter describes the noninvasive sampling of tuberculous sputa and techniques for mRNA profiling M. tb bacilli during patient therapy to characterize real-world drug actions.

摘要

耐药性的出现有可能破坏全球结核病控制项目,目前已检测到对所有一线药物和大多数二线药物的耐药情况。在针对药物敏感型结核病的长达6个月的标准治疗期间,药物耐受性(或表型耐药性)在临床上也可能具有相关性。对结核分枝杆菌对抗菌药物的反应进行转录谱分析,为药物疗效和分枝杆菌药敏性提供了一种新的解释,而这在动态微环境(如肺部)中可能会有所不同。本章介绍了结核痰液的非侵入性采样以及在患者治疗期间对结核杆菌进行mRNA谱分析的技术,以表征实际的药物作用。

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Transcriptional Profiling Mycobacterium tuberculosis from Patient Sputa.来自患者痰液的结核分枝杆菌转录谱分析
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Profiling persistent tubercule bacilli from patient sputa during therapy predicts early drug efficacy.在治疗期间对患者痰液中的持续性结核杆菌进行分析可预测早期药物疗效。
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本文引用的文献

1
Profiling persistent tubercule bacilli from patient sputa during therapy predicts early drug efficacy.在治疗期间对患者痰液中的持续性结核杆菌进行分析可预测早期药物疗效。
BMC Med. 2016 Apr 7;14:68. doi: 10.1186/s12916-016-0609-3.
2
Transcriptional Adaptation of Drug-tolerant Mycobacterium tuberculosis During Treatment of Human Tuberculosis.人类结核病治疗期间耐多药结核分枝杆菌的转录适应性
J Infect Dis. 2015 Sep 15;212(6):990-8. doi: 10.1093/infdis/jiv149. Epub 2015 Mar 11.
3
Global transcriptional profiling of longitudinal clinical isolates of Mycobacterium tuberculosis exhibiting rapid accumulation of drug resistance.结核分枝杆菌临床纵向分离株快速耐药积累的全转录组分析。
PLoS One. 2013;8(1):e54717. doi: 10.1371/journal.pone.0054717. Epub 2013 Jan 23.
4
Linking the transcriptional profiles and the physiological states of Mycobacterium tuberculosis during an extended intracellular infection.在延长的细胞内感染期间将结核分枝杆菌的转录谱与生理状态联系起来。
PLoS Pathog. 2012;8(6):e1002769. doi: 10.1371/journal.ppat.1002769. Epub 2012 Jun 21.
5
Use of DNA arrays to study transcriptional responses to antimycobacterial compounds.利用DNA阵列研究对抗分枝杆菌化合物的转录反应。
Methods Mol Biol. 2010;642:75-91. doi: 10.1007/978-1-60327-279-7_6.
6
Cytological and transcript analyses reveal fat and lazy persister-like bacilli in tuberculous sputum.细胞学和转录分析揭示了结核痰液中存在脂肪样和懒惰型持留菌样杆菌。
PLoS Med. 2008 Apr 1;5(4):e75. doi: 10.1371/journal.pmed.0050075.
7
Microarray analysis of defined Mycobacterium tuberculosis populations using RNA amplification strategies.运用RNA扩增策略对特定结核分枝杆菌群体进行微阵列分析。
BMC Genomics. 2008 Feb 25;9:94. doi: 10.1186/1471-2164-9-94.
8
Probing host pathogen cross-talk by transcriptional profiling of both Mycobacterium tuberculosis and infected human dendritic cells and macrophages.通过对结核分枝杆菌以及受感染的人类树突状细胞和巨噬细胞进行转录谱分析来探究宿主-病原体的相互作用。
PLoS One. 2008 Jan 2;3(1):e1403. doi: 10.1371/journal.pone.0001403.
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Mycobacterial bacilli are metabolically active during chronic tuberculosis in murine lungs: insights from genome-wide transcriptional profiling.分枝杆菌在小鼠肺部慢性结核期间代谢活跃:全基因组转录谱分析的见解
J Bacteriol. 2007 Jun;189(11):4265-74. doi: 10.1128/JB.00011-07. Epub 2007 Mar 23.
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Unique transcriptome signature of Mycobacterium tuberculosis in pulmonary tuberculosis.肺结核中结核分枝杆菌独特的转录组特征
Infect Immun. 2006 Feb;74(2):1233-42. doi: 10.1128/IAI.74.2.1233-1242.2006.