Suppr超能文献

中国亚热带青杨(杨柳科)种群经历强烈瓶颈效应和多次种群扩张。

Strong population bottleneck and repeated demographic expansions of Populus adenopoda (Salicaceae) in subtropical China.

机构信息

Key Laboratory of Bio-Resource and Eco-Environment of Ministry of Education, College of Life Sciences, Sichuan University, Sichuan, P. R. China.

State Key Laboratory of Cotton Biology, Institute of Cotton Research, Chinese Academy of Agricultural Sciences, Henan, P. R. China.

出版信息

Ann Bot. 2018 Mar 14;121(4):665-679. doi: 10.1093/aob/mcx198.

Abstract

BACKGROUND AND AIMS

Glacial refugia and inter-/postglacial recolonization routes during the Quaternary of tree species in Europe and North America are well understood, but far less is known about those of tree species in subtropical eastern Asia. Thus, we have examined the phylogeographic history of Populus adenopoda (Salicaceae), one of the few poplars that naturally occur in this subtropical area.

METHODS

Genetic variations across the range of the species in subtropical China were surveyed using ten nuclear microsatellite loci and four chloroplast fragments (matK, trnG-psbK, psbK-psbI and ndhC-trnV). Coalescent-based analyses were used to test demographic and migration hypotheses. In addition, species distribution models (SDMs) were constructed to infer past, present and future potential distributions of the species.

KEY RESULTS

Thirteen chloroplast haplotypes were detected, and haplotype-rich populations were found in central and southern parts of the species' range. STRUCTURE analyses of nuclear microsatellite loci suggest obvious lineage admixture, especially in peripheral and northern populations. DIYABC analysis suggests that the species might have experienced two independent rounds of demographic expansions and a strong bottleneck in the late Quaternary. SDMs indicate that the species' range contracted during the Last Glacial Maximum (LGM), and contracted northward but expanded eastward during the Last Interglacial (LIG).

CONCLUSIONS

Chloroplast data and SDMs suggest that P. adenopoda might have survived in multiple glacial refugia in central and southern parts of its range during the LGM. Populations of the Yunnan-Guizhou Plateau in the southern part have high chloroplast DNA diversity, but may have contributed little to the postglacial recolonization of northern and eastern parts. The three major demographic events inferred by DIYABC coincide with the initiation of the LIG, start of the LGM and end of the LGM, respectively. The species may have experienced multiple rounds of range contraction during glacial periods and range expansion during interglacial periods. Our study corroborates the importance of combining multiple lines of evidence when reconstructing Quaternary population evolutionary histories.

摘要

背景与目的

在欧洲和北美的树木物种的第四纪中,冰川避难所和冰期后/间重新殖民路线已经得到了很好的理解,但对于亚热带东亚的树木物种的了解要少得多。因此,我们研究了杨属的一种,即腺柳(杨科),它是亚热带地区自然生长的少数杨树之一。

方法

利用十个核微卫星位点和四个叶绿体片段(matK、trnG-psbK、psbK-psbI 和 ndhC-trnV),调查了亚热带中国物种范围内的遗传变异。利用基于合并的分析来检验人口和迁移假说。此外,还构建了物种分布模型(SDMs),以推断物种过去、现在和未来的潜在分布。

结果

检测到 13 种叶绿体单倍型,丰富的单倍型种群分布在物种分布范围的中部和南部。核微卫星位点的 STRUCTURE 分析表明存在明显的谱系混合,尤其是在边缘和北部种群中。DIYABC 分析表明,该物种可能在第四纪经历了两轮独立的种群扩张和一次强烈的瓶颈。SDMs 表明,该物种的分布范围在末次冰期最大(LGM)期间收缩,在末次间冰期(LIG)期间向北收缩但向东扩张。

结论

叶绿体数据和 SDMs 表明,在 LGM 期间,腺柳可能在其分布范围的中部和南部的多个冰川避难所中幸存下来。南部云贵高原的种群具有较高的叶绿体 DNA 多样性,但对北部和东部的冰后期重新殖民贡献可能较小。通过 DIYABC 推断的三个主要人口事件分别与 LIG 的开始、LGM 的开始和 LGM 的结束相对应。该物种可能在冰期经历了多次范围收缩,在间冰期经历了多次范围扩张。我们的研究证实了在重建第四纪种群进化历史时结合多种证据的重要性。

相似文献

引用本文的文献

本文引用的文献

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验