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MRB7260 对于原生动物 RNA 编辑过程中 RNA 编辑底物结合复合物内有效的蛋白-RNA 相互作用是必需的。

MRB7260 is essential for productive protein-RNA interactions within the RNA editing substrate binding complex during trypanosome RNA editing.

机构信息

Department of Microbiology and Immunology, University at Buffalo Jacobs School of Medicine and Biomedical Sciences, Buffalo, New York 14203, USA.

Department of Computer Science and Engineering, University at Buffalo, Buffalo, New York 14260, USA.

出版信息

RNA. 2018 Apr;24(4):540-556. doi: 10.1261/rna.065169.117. Epub 2018 Jan 12.

Abstract

The trypanosome NA diting ubstrate binding omplex (RESC) acts as the platform for mitochondrial uridine insertion/deletion RNA editing and facilitates the protein-protein and protein-RNA interactions required for the editing process RESC is broadly comprised of two subcomplexes: GRBC (uide NA inding omplex) and REMC (NA diting ediator omplex). Here, we characterize the function and position in RESC organization of a previously unstudied RESC protein, MRB7260. We show that MRB7260 forms numerous RESC-related complexes, including a novel, small complex with the guide RNA binding protein, GAP1, which is a canonical GRBC component, and REMC components MRB8170 and TbRGG2. RNA immunoprecipitations in MRB7260-depleted cells show that MRB7260 is critical for normal RNA trafficking between REMC and GRBC. Analysis of protein-protein interactions also reveals an important role for MRB7260 in promoting stable association of the two subcomplexes. High-throughput sequencing analysis of RPS12 mRNAs from MRB7260 replete and depleted cells demonstrates that MRB7260 is critical for gRNA exchange and early gRNA utilization, with the exception of the initiating gRNA. Together, these data demonstrate that MRB7260 is essential for productive protein-RNA interactions with RESC during RNA editing.

摘要

锥虫 NA 二肽底物结合复合物(RESC)作为线粒体尿嘧啶插入/缺失 RNA 编辑的平台,促进编辑过程所需的蛋白质-蛋白质和蛋白质-RNA 相互作用。RESC 广泛由两个亚复合物组成:GRBC(指导 RNA 结合复合物)和 REMC(NA 编辑调节剂复合物)。在这里,我们描述了以前未研究过的 RESC 蛋白 MRB7260 在 RESC 组织中的功能和位置。我们表明,MRB7260 形成了许多与 RESC 相关的复合物,包括与指导 RNA 结合蛋白 GAP1 的新型小复合物,GAP1 是 GRBC 的规范组成部分,以及 REMC 组件 MRB8170 和 TbRGG2。在 MRB7260 耗尽细胞中的 RNA 免疫沉淀显示,MRB7260 对于 REMC 和 GRBC 之间正常的 RNA 运输至关重要。蛋白质-蛋白质相互作用分析还揭示了 MRB7260 在促进两个亚复合物稳定关联中的重要作用。从 MRB7260 补充和耗尽细胞中 RPS12 mRNAs 的高通量测序分析表明,MRB7260 对于 gRNA 交换和早期 gRNA 利用至关重要,除了起始 gRNA 之外。这些数据表明,MRB7260 在 RNA 编辑过程中对于与 RESC 进行有效的蛋白质-RNA 相互作用至关重要。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/be3e/5855954/93a47cdbde5a/540f01.jpg

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