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考特拉克和牦牛睾丸组织中差异表达的 microRNAs。

Differentially expressed microRNAs between cattleyak and yak testis.

机构信息

School of Life Science and Engineering, Southwest University of Science and Technology, Mianyang, 621010, Sichuan, China.

College of Life Science and Technology, Southwest University for Nationalities, Chengdu, 610041, Sichuan, China.

出版信息

Sci Rep. 2018 Jan 12;8(1):592. doi: 10.1038/s41598-017-18607-0.

Abstract

Cattleyak are interspecific hybrids between cattle and yak, exhibiting the same prominent adaptability as yak and much higher performances than yak. However, male infertility of cattleyak resulted from spermatogenic arrest has greatly restricted their effective utilization in yak breeding. In past decades, much work has been done to investigate the mechanisms of spermatogenic arrest, but little is known about the differences of the post-transcriptional regulators between cattleyak and yak, which may contribute to the impaired spermatogenesis. MiRNAs, a class of endogenous non-coding small RNA, were revealed to play crucial roles in regulating gene expression at post-transcriptional level. In the present study, we identified 50 differentially expressed (DE) known miRNAs and 11 novel miRNAs by using Illumina HISeq and bioinformatic analysis. A total of 50 putative target sites for the 13 DE known miRNAs and 30 for the 6 DE novel miRNAs were identified, respectively. GO and KEGG analyses were performed to reveal the functions of target genes for DE miRNAs. In addition, RT-qPCR was performed to validate the expression of the DE miRNAs and its targets. The identification of these miRNAs may provide valuable information for a better understanding of spermatogenic arrest in cattleyak.

摘要

犏牛是牦牛和黄牛的种间杂种,表现出与牦牛相同的显著适应性,性能远高于牦牛。然而,犏牛雄性不育是由于精子发生停滞所致,这极大地限制了它们在牦牛繁殖中的有效利用。在过去的几十年中,已经做了大量的工作来研究精子发生停滞的机制,但对犏牛和牦牛之间转录后调控因子的差异知之甚少,这可能导致精子发生受损。miRNAs 是一类内源性非编码小 RNA,被揭示在转录后水平上对基因表达起着至关重要的调节作用。本研究通过 Illumina HISeq 和生物信息学分析,鉴定出 50 个差异表达(DE)的已知 miRNAs 和 11 个新的 miRNAs。分别鉴定出 50 个 DE 已知 miRNA 和 30 个 DE 新 miRNA 的 13 个 DE 已知 miRNA 和 6 个 DE 新 miRNA 的推定靶位点。GO 和 KEGG 分析分别用于揭示 DE miRNA 及其靶基因的功能。此外,还进行了 RT-qPCR 以验证 DE miRNAs 和其靶基因的表达。这些 miRNAs 的鉴定可能为更好地理解犏牛的精子发生停滞提供有价值的信息。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d6b4/5766512/56c8fa78b400/41598_2017_18607_Fig1_HTML.jpg

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