Suppr超能文献

与链球菌蛋白G(GB1)的B1结构域融合的人类蛋白激酶共济失调毛细血管扩张突变(ATM)和DNA依赖性蛋白激酶催化亚基(DNA-PKcs)的胶束包埋FAT C末端(FATC)结构域的H、N和C化学位移归属。

H, N, and C chemical shift assignments of the micelle immersed FAT C-terminal (FATC) domains of the human protein kinases ataxia-telangiectasia mutated (ATM) and DNA-dependent protein kinase catalytic subunit (DNA-PKcs) fused to the B1 domain of streptococcal protein G (GB1).

作者信息

Rahim Munirah S Abd, Sommer Lisa A M, Wacker Anja, Schaad Martin, Dames Sonja A

机构信息

Department of Chemistry, Biomolecular NMR Spectroscopy, Technische Universität München, Lichtenbergstr. 4, 85747, Garching, Germany.

Roche Diagnostics GmbH, Centralised and Point of Care Solutions, Nonnenwald 2, 82377, Penzberg, Germany.

出版信息

Biomol NMR Assign. 2018 Apr;12(1):149-154. doi: 10.1007/s12104-018-9798-3. Epub 2018 Jan 18.

Abstract

FAT C-terminal (FATC) is a circa 33 residue-long domain. It controls the kinase functionality in phosphatidylinositol-3 kinase-related kinases (PIKKs). Recent NMR- and CD-monitored interaction studies indicated that the FATC domains of all PIKKs can interact with membrane mimetics albeit with different preferences for membrane properties such as surface charge and curvature. Thus they may generally act as membrane anchoring unit. Here, we present the H, N, and C chemical shift assignments of the DPC micelle immersed FATC domains of the human PIKKs ataxia-telangiectasia mutated (ATM, residues 3024-3056) and DNA protein kinase catalytic subunit (DNA-PKcs, residues 4096-4128), both fused to the 56 residue long B1 domain of Streptococcal protein G (GB1). Each fusion protein is 100 amino acids long and contains in the linking region between the GB1 tag and the FATC region a thrombin (LVPRGS) and an enterokinase (DDDDK) protease site. The assignments pave the route for the detailed structural characterization of the membrane mimetic bound states, which will help to better understand the role of the proper cellular localization at membranes for the function and regulation of PIKKs. The chemical shift assignment of the GB1 tag is useful for NMR spectroscopists developing new experiments or using GB1 otherwise for case studies in the field of in-cell NMR spectroscopy or protein folding. Moreover it is often used as purification tag. Earlier we showed already that GB1 does not interact with membrane mimetics and thus does not disturb the NMR monitoring of membrane mimetic interactions of attached proteins.

摘要

FAT C末端(FATC)是一个约33个残基长的结构域。它控制磷脂酰肌醇-3激酶相关激酶(PIKKs)中的激酶功能。最近的核磁共振(NMR)和圆二色性(CD)监测的相互作用研究表明,所有PIKKs的FATC结构域都能与膜模拟物相互作用,尽管对膜性质如表面电荷和曲率有不同的偏好。因此,它们通常可作为膜锚定单元。在此,我们给出了人PIKKs中共济失调毛细血管扩张症突变基因(ATM,第3024 - 3056位残基)和DNA蛋白激酶催化亚基(DNA-PKcs,第4096 - 4128位残基)的FATC结构域在二棕榈酰磷脂酰胆碱(DPC)胶束中的氢、氮和碳化学位移归属,这两个结构域都与链球菌蛋白G(GB1)的56个残基长的B1结构域融合。每个融合蛋白长度为100个氨基酸,在GB1标签和FATC区域之间的连接区域包含一个凝血酶(LVPRGS)和一个肠激酶(DDDDK)蛋白酶切割位点。这些归属为膜模拟物结合态的详细结构表征铺平了道路,这将有助于更好地理解膜上正确的细胞定位对PIKKs功能和调控的作用。GB1标签的化学位移归属对NMR光谱学家开发新实验或在细胞内NMR光谱学或蛋白质折叠领域的案例研究中以其他方式使用GB1很有用。此外,它常被用作纯化标签。我们之前已经表明GB1不与膜模拟物相互作用,因此不会干扰对附着蛋白的膜模拟物相互作用的NMR监测。

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验