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基于核型和 16S 和 ITS1 rDNA 序列对厚壳贻贝属(双壳纲)物种分化的评论以及厚壳贻贝和毛蚶变种的系统发育关系。

Comments on species divergence in the genus Sphaerium (Bivalvia) and phylogenetic affinities of Sphaerium nucleus and S. corneum var. mamillanum based on karyotypes and sequences of 16S and ITS1 rDNA.

机构信息

P. B. Šivickis Laboratory of Parasitology, Nature Research Centre, Vilnius, Lithuania.

出版信息

PLoS One. 2018 Jan 23;13(1):e0191427. doi: 10.1371/journal.pone.0191427. eCollection 2018.

Abstract

Chromosome, 16S and ITS1 rDNA sequence analyses were used to obtain reliable diagnostic characters and to clarify phylogenetic relationships of sphaeriid bivalves of the genus Sphaerium. The species studied were found to be diploid, with modal number 2n = 28 in S. nucleus and 2n = 30 in S. corneum var. mamillanum. Small, biarmed, C- negative B chromosomes were found in all studied populations of both species. Karyological and molecular markers revealed no differences between S. corneum s. str. and S. corneum var. mamillanum. No intraspecific differences were found in the basic karyotype of S. nucleus. Molecular analyses, however, uncovered three genetically distinct ITS1 lineages: one comprised of samples from Lithuania, Slovakia, and Russia, another from Czech, and a third from Ukraine. Additionally to known 16S haplotype from Ukraine, three new 16S haplotypes of S. nucleus were detected: one in the samples from Lithuania and Russia, one in Slovakian and one in Czech population. In the ITS1 phylogenetic tree, all branches of S. nucleus clustered in one clade. In the 16S phylogenetic tree, however, the haplotype of Czech S. nucleus formed a separate branch, distant from three other haplotypes of S. nucleus. Molecular results indicate that in the context of the Evolutionary Species Concept the S. nucleus morphospecies may represent a complex of separate taxa, however referring on the Biological Species Concept the genetic lineages could represent the intraspecific variability.

摘要

染色体、16S 和 ITS1 rDNA 序列分析被用于获得可靠的诊断特征,并阐明厚壳贻贝属贝类的系统发育关系。研究的物种被发现是二倍体,其中细胞核的模式数为 2n = 28,角厚壳贻贝的模式数为 2n = 30。在两个物种的所有研究种群中都发现了小型、双臂、C-阴性 B 染色体。核型和分子标记显示角厚壳贻贝 s. str. 和角厚壳贻贝 var. mamillanum 之间没有差异。细胞核的基本核型没有发现种内差异。然而,分子分析揭示了三个具有遗传差异的 ITS1 谱系:一个包含来自立陶宛、斯洛伐克和俄罗斯的样本,另一个来自捷克,第三个来自乌克兰。除了来自乌克兰的已知 16S 单倍型外,还检测到细胞核的三个新的 16S 单倍型:一个来自立陶宛和俄罗斯的样本,一个来自斯洛伐克的样本,一个来自捷克的样本。在 ITS1 系统发育树中,细胞核的所有分支都聚集在一个分支中。然而,在 16S 系统发育树中,捷克细胞核的单倍型形成了一个单独的分支,与细胞核的其他三个单倍型相距甚远。分子结果表明,在进化物种概念的背景下,细胞核形态物种可能代表一个独立分类群的复合体,但在生物物种概念中,遗传谱系可能代表种内变异性。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6f9e/5779677/6c02abf3d3f5/pone.0191427.g001.jpg

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