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用于测量佛罗里达海牛(Trichechus manatus latirostris)细胞因子转录水平的定量PCR检测方法的开发与验证

DEVELOPMENT AND VALIDATION OF QUANTITATIVE PCR ASSAYS TO MEASURE CYTOKINE TRANSCRIPT LEVELS IN THE FLORIDA MANATEE ( TRICHECHUS MANATUS LATIROSTRIS).

作者信息

Ferrante Jason A, Hunter Margaret E, Wellehan James F X

机构信息

1   Wetland and Aquatic Research Center, US Geological Survey, 7920 NW 71st Street, Gainesville, Florida 32653, USA.

2   Department of Comparative, Diagnostic, and Population Medicine, College of Veterinary Medicine, University of Florida, 2015 SW 16th Avenue, Gainesville, Florida 32608, USA.

出版信息

J Wildl Dis. 2018 Apr;54(2):283-294. doi: 10.7589/2017-06-139. Epub 2018 Jan 25.

Abstract

Cytokines have important roles in the mammalian response to viral and bacterial infections, trauma, and wound healing. Because of early cytokine production after physiologic stresses, the regulation of messenger RNA (mRNA) transcripts can be used to assess immunologic responses before changes in protein production. To detect and assess early immune changes in endangered Florida manatees ( Trichechus manatus latirostris), we developed and validated a panel of quantitative PCR assays to measure mRNA transcription levels for the cytokines interferon (IFN)-γ; interleukin (IL)-2, -6, and -10; tumor necrosis factor-α; and the housekeeping genes glyceraldehyde-3-phosphate dehydrogenase (GAPDH) and β-actin (reference genes). Assays were successfully validated using blood samples from free-ranging, apparently healthy manatees from the east and west coasts of central Florida, US. No cytokine or housekeeping gene transcription levels were significantly different among age classes or sexes. However, the transcription levels for GAPDH, IL-2, IL-6, and IFN-γ were significantly higher ( P<0.05) in manatees from the east coast of Florida than they were from those from the west coast. We found IL-10 and β-actin to be consistent between sites and identified β-actin as a good candidate for use as a reference gene in future studies. Our assays can aid in the investigation of manatee immune response to physical trauma and novel or ongoing environmental stressors.

摘要

细胞因子在哺乳动物对病毒和细菌感染、创伤及伤口愈合的反应中发挥着重要作用。由于生理应激后细胞因子产生较早,信使核糖核酸(mRNA)转录本的调控可用于在蛋白质产生变化之前评估免疫反应。为了检测和评估濒危的佛罗里达海牛(Trichechus manatus latirostris)早期的免疫变化,我们开发并验证了一组定量聚合酶链反应(PCR)检测方法,以测量细胞因子干扰素(IFN)-γ、白细胞介素(IL)-2、-6和-10、肿瘤坏死因子-α以及管家基因甘油醛-3-磷酸脱氢酶(GAPDH)和β-肌动蛋白(参考基因)的mRNA转录水平。使用来自美国佛罗里达州中部东西海岸自由放养、看似健康的海牛的血液样本成功验证了这些检测方法。不同年龄组或性别之间的细胞因子或管家基因转录水平没有显著差异。然而,佛罗里达州东海岸海牛的GAPDH、IL-2、IL-6和IFN-γ转录水平显著高于西海岸海牛(P<0.05)。我们发现IL-10和β-肌动蛋白在不同地点之间是一致的,并确定β-肌动蛋白是未来研究中用作参考基因的良好候选者。我们的检测方法有助于研究海牛对身体创伤以及新出现或持续存在的环境应激源的免疫反应。

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