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日本自 2015 年以来流行的与 epidemic keratoconjunctivitis 相关的重组型人腺病毒 D85。

Recombinant type Human mastadenovirus D85 associated with epidemic keratoconjunctivitis since 2015 in Japan.

机构信息

Department of Microbiology, Kumamoto Prefectural Institute of Public-Health and Environmental Science, Kumamoto, Japan.

Division of Bioinformatics, Research Center for Zoonosis Control, Hokkaido University, Sapporo, Japan.

出版信息

J Med Virol. 2018 May;90(5):881-889. doi: 10.1002/jmv.25041. Epub 2018 Feb 15.

Abstract

The aim of this study was to report the emergence of a recombinant human mastadenovirus (HAdV) type 85 (HAdV-85) and to describe its genomic and clinical characteristics. The strains were detected and identified in Japan in cases of adenoviral conjunctivitis including epidemic keratoconjunctivitis (EKC). The type was designated as HAdV-85 based on the novel combination of penton base (P = HAdV-37), hexon (H = HAdV-19), and fiber (F = HAdV-8). The whole genome sequence determined for HAdV-85 was compared against sequences of other types in the same species. The results of the phylogenetic analysis suggested a recombinant origin between HAdV-53 and HAdV-64, which have been two major causes of adenoviral EKC in Japan over the past decade. During the period between 2008 and 2016 in Kumamoto city, southwest of Japan, 311 cases diagnosed with conjunctivitis were diagnosed as being the consequence of adenoviral infections. Among them, 11 cases were determined to have been caused by HAdV-85 since 2015. Thus, HAdV-85 could be an emerging causative agent of adenoviral conjunctivitis.

摘要

本研究旨在报告一种重组人腺病毒(HAdV)85 型(HAdV-85)的出现,并描述其基因组和临床特征。这些病毒株在日本的腺病毒结膜炎病例中被检测和鉴定,包括流行角膜结膜炎(EKC)。该病毒株被命名为 HAdV-85,基于五邻体(P=HAdV-37)、六邻体(H=HAdV-19)和纤维(F=HAdV-8)的新组合。HAdV-85 的全基因组序列与同一物种中其他类型的序列进行了比较。系统发育分析的结果表明,HAdV-53 和 HAdV-64 之间存在重组起源,这两种病毒株在过去十年中一直是日本 EKC 的主要病因。在日本西南部熊本市,2008 年至 2016 年期间,诊断出 311 例结膜炎病例为腺病毒感染所致。其中,11 例于 2015 年被确定为 HAdV-85 感染。因此,HAdV-85 可能是一种新出现的腺病毒结膜炎致病因子。

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