Key Laboratory of Carbohydrate Chemistry and Biotechnology, Ministry of Education, School of Biotechnology, Jiangnan University, 1800 Lihu Road, Wuxi, Jiangsu, 214122, People's Republic of China.
State Key Laboratory of Food Science and Technology, School of Food Science and Technology, Jiangnan University, 1800 Lihu Road, Wuxi, Jiangsu, 214122, People's Republic of China.
Appl Biochem Biotechnol. 2018 Aug;185(4):1044-1059. doi: 10.1007/s12010-017-2681-3. Epub 2018 Feb 6.
To improve the temperature characteristics of AoXyn11A, a mesophilic glycoside hydrolase family (GHF) 11 xylanase from Aspergillus oryzae CICC40186, its N-terminal and "cord" regions were selected to be substituted by means of the computer-aided analysis and calculation. In brief, one mutant, named ATX11A, possessing the lowest root-mean-square deviation (RMSD) value was designed based on the molecular dynamics (MD) simulation by substituting the N-terminal 41 amino acids of AoXyn11A with the corresponding 42 ones of pXYL11, a thermophilic GHF11 xylanase from Thermobifida fusca. On the basis of the primary structure alignment of pXYL11 with ATX11A (or AoXyn11A), another mutant, named ATX11A, was designed by substituting the cord region (GTYNPGSGG) of ATX11A with the corresponding one (GTYRPTG) of pXYL11. Both mutant-encoding genes, ATx11A and ATx11A, were constructed as designed theoretically by a megaprimer PCR technique and were expressed in Pichia pastoris GS115. The specific activities of recombinant (re) AoXyn11A, ATX11A, and ATX11A were 2916.7, 2667.6, and 2457.0 U/mg, respectively. The analysis of temperature characteristics displayed that the temperature optimum (T) of reATX11A or reATX11A was 65 °C, which was 15 °C higher than that of reAoXyn11A. The thermal inactivation half-life (t) values of reATX11A and reATX11A at 60 °C were 55 and 83 min, respectively, whereas that of reAoXyn11A was only 18 min at 50 °C. The melting temperature (T) values of reAoXyn11A, reATX11A, and reATX11A were 54.2, 66.7, and 71.9 °C, respectively. In conclusion, the above findings indicated that the substitution of both the N-terminal and cord regions of a mesophilic AoXyn11A greatly contributed to its improved temperature characteristics.
为改善米曲霉来源的嗜温糖苷水解酶家族(GHF)11 木聚糖酶 AoXyn11A 的温度特性,通过计算机辅助分析和计算,选择对其 N 末端和“绳线”区域进行取代。简而言之,根据分子动力学(MD)模拟,设计了一个突变体 ATX11A,该突变体的 N 末端 41 个氨基酸被来自嗜热栖热菌的热稳定 GHF11 木聚糖酶 pXYL11 的相应氨基酸取代,其最低均方根偏差(RMSD)值。在 pXYL11 与 ATX11A(或 AoXyn11A)的一级结构比对的基础上,通过将 ATX11A 的绳线区域(GTYNPGSGG)替换为 pXYL11 的相应区域(GTYRPTG),设计了另一个突变体 ATX11A。这两个突变体编码基因 ATx11A 和 ATx11A 均通过 megaprimer PCR 技术理论构建,并在毕赤酵母 GS115 中表达。重组(re)AoXyn11A、ATX11A 和 ATX11A 的比活性分别为 2916.7、2667.6 和 2457.0 U/mg。温度特性分析表明,reATX11A 或 reATX11A 的最适温度(T)为 65°C,比 reAoXyn11A 高 15°C。reATX11A 和 reATX11A 在 60°C 时的热失活动力学半衰期(t)值分别为 55 和 83 min,而 reAoXyn11A 在 50°C 时仅为 18 min。reAoXyn11A、reATX11A 和 reATX11A 的熔点(T)值分别为 54.2、66.7 和 71.9°C。综上所述,这些发现表明,对嗜温 AoXyn11A 的 N 末端和绳线区域的同时取代极大地促进了其温度特性的改善。