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β-(1-脱氧-β-D-呋喃果糖-1-基)-2-氨基异丁酸中的晶体结构与氢键

Crystal structure and hydrogen bonding in -(1-de-oxy-β-d-fructo-pyranos-1-yl)-2-amino-isobutyric acid.

作者信息

Mossine Valeri V, Barnes Charles L, Mawhinney Thomas P

机构信息

Department of Biochemistry, University of Missouri, Columbia, MO 65211, USA.

Department of Chemistry, University of Missouri, Columbia, MO 65211, USA.

出版信息

Acta Crystallogr E Crystallogr Commun. 2018 Jan 1;74(Pt 1):72-77. doi: 10.1107/S2056989017018060.

Abstract

The title compound, alternatively called d-fructose-2-amino-isobutyric acid (FruAib), CHNO, (I), crystallizes exclusively in the β-pyran-ose form, with two conformationally non-equivalent mol-ecules [(I) and (I)] in the asymmetric unit. In solution, FruAib establishes an equilibrium, with 75.6% of the population consisting of β-pyran-ose, 10.4% β-furan-ose, 10.1% α-furan-ose, 3.0% α-pyran-ose and <0.7% the acyclic forms. The carbohydrate ring in (I) has the normal chair conformation and the amino acid portion is in the zwitterion form. Bond lengths and valence angles compare well with the average values from related pyran-ose structures. All carboxyl, hy-droxy and ammonium groups are involved in hydrogen bonding and form a three-dimensional network of infinite chains that are connected through homodromic rings and short chains. Intra-molecular hydrogen bonds bridge the amino acid and sugar portions in both mol-ecules. A comparative Hirshfeld surfaces analysis of FruAib and four other sugar-amino acids suggests an increasing role of intra-molecular heteroatom inter-actions in crystal structures with an increasing proportion of C-H bonds.

摘要

标题化合物,又称d-果糖-2-氨基异丁酸(FruAib),化学式为C₆H₁₃NO₅,(I),仅以β-吡喃糖形式结晶,不对称单元中有两个构象不等价的分子[(I)和(I)]。在溶液中,FruAib建立了一种平衡,其中75.6%的分子为β-吡喃糖形式,10.4%为β-呋喃糖形式,10.1%为α-呋喃糖形式,3.0%为α-吡喃糖形式,<0.7%为开链形式。(I)中的碳水化合物环具有正常的椅式构象,氨基酸部分为两性离子形式。键长和价键角与相关吡喃糖结构的平均值比较吻合。所有羧基、羟基和铵基团都参与氢键形成,并形成一个通过同形环和短链连接的无限链三维网络。分子内氢键在两个分子中连接氨基酸和糖部分。对FruAib和其他四种糖氨基酸的Hirshfeld表面比较分析表明,随着C-H键比例的增加,分子内杂原子相互作用在晶体结构中的作用越来越大。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/aff6/5778490/0ac25e034d39/e-74-00072-fig1.jpg

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