• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

三个关联群体中的QTL定位揭示了一组关于番茄低温发芽能力的共有的基因组区域

QTL Mapping in Three Connected Populations Reveals a Set of Consensus Genomic Regions for Low Temperature Germination Ability in L.

作者信息

Li Xuhui, Wang Guihua, Fu Junjie, Li Li, Jia Guangyao, Ren Lisha, Lubberstedt Thomas, Wang Guoying, Wang Jianhua, Gu Riliang

机构信息

Center of Seed Science and Technology, Beijing Key Laboratory of Crop Genetics and Breeding, Innovation Center for Seed Technology (Ministry of Agriculture), China Agricultural University, Beijing, China.

Institute of Crop Sciences, Chinese Academy of Agricultural Sciences, Beijing, China.

出版信息

Front Plant Sci. 2018 Jan 31;9:65. doi: 10.3389/fpls.2018.00065. eCollection 2018.

DOI:10.3389/fpls.2018.00065
PMID:29445387
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC5797882/
Abstract

Improving seed vigor in response to cold stress is an important breeding objective in maize that allows early sowing. Using two cold tolerant inbred lines 220 and P9-10 and two susceptible lines Y1518 and PH4CV, three connected F populations were generated for detecting quantitative trait locus (QTL) related to seed low-temperature germination ability. At 10°C, two germination traits (emergence rate and germination index) were collected from a sand bed and three seedling traits (seedling root length, shoot length, and total length) were extracted from paper rolls. Significant correlations were found among all traits in all populations. Via single-population analysis, 43 QTL were detected with explained phenotypic variance of 0.62%∼39.44%. Seventeen QTL explained more than 10% phenotypic variance; of them sixteen (94.12%) inherited favorable alleles from the tolerant lines. After constructing a consensus map, three meta-QTL (mQTL) were identified to include at least two initial QTL from different populations. included seven initial QTL for both germination and seedling traits; with three explaining more than 30% phenotypic variance. and covered two to three initial QTL. The favorable alleles of the QTL within these three mQTL regions were all inherited from the tolerant line 220 and P9-10. These results provided a basis for cloning of genes underlying the mQTL regions to uncover the molecular mechanisms of maize cold tolerance during germination.

摘要

提高玉米应对冷胁迫时的种子活力是一个重要的育种目标,这有助于实现早播。利用两个耐冷自交系220和P9 - 10以及两个感病系Y1518和PH4CV,构建了三个连锁的F群体,用于检测与种子低温发芽能力相关的数量性状位点(QTL)。在10°C条件下,从沙床收集了两个发芽性状(出苗率和发芽指数),并从纸卷中提取了三个幼苗性状(幼苗根长、苗长和总长)。在所有群体的所有性状之间均发现了显著相关性。通过单群体分析,共检测到43个QTL,其解释的表型变异为0.62%至39.44%。17个QTL解释的表型变异超过10%;其中16个(94.12%)从耐冷系中继承了有利等位基因。构建整合图谱后,鉴定出三个元QTL(mQTL),每个mQTL至少包含来自不同群体的两个初始QTL。其中一个mQTL包含与发芽和幼苗性状相关的7个初始QTL;其中3个解释的表型变异超过30%。另外两个mQTL分别涵盖2至3个初始QTL。这三个mQTL区域内QTL的有利等位基因均来自耐冷系220和P9 - 10。这些结果为克隆mQTL区域的基因以揭示玉米发芽期耐冷性的分子机制提供了依据。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e1a4/5797882/3b8ebfb22bf8/fpls-09-00065-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e1a4/5797882/9893e04cee71/fpls-09-00065-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e1a4/5797882/4e646cd4b2d5/fpls-09-00065-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e1a4/5797882/6bcc30bb28c3/fpls-09-00065-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e1a4/5797882/3b8ebfb22bf8/fpls-09-00065-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e1a4/5797882/9893e04cee71/fpls-09-00065-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e1a4/5797882/4e646cd4b2d5/fpls-09-00065-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e1a4/5797882/6bcc30bb28c3/fpls-09-00065-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e1a4/5797882/3b8ebfb22bf8/fpls-09-00065-g004.jpg

相似文献

1
QTL Mapping in Three Connected Populations Reveals a Set of Consensus Genomic Regions for Low Temperature Germination Ability in L.三个关联群体中的QTL定位揭示了一组关于番茄低温发芽能力的共有的基因组区域
Front Plant Sci. 2018 Jan 31;9:65. doi: 10.3389/fpls.2018.00065. eCollection 2018.
2
QTL Mapping of Low-Temperature Germination Ability in the Maize IBM Syn4 RIL Population.玉米IBM Syn4重组自交系群体低温发芽能力的QTL定位
PLoS One. 2016 Mar 31;11(3):e0152795. doi: 10.1371/journal.pone.0152795. eCollection 2016.
3
Transcriptome Analysis of Near-Isogenic Lines Provides Novel Insights into Genes Associated with Seed Low-Temperature Germination Ability in Maize ( L.).近等基因系的转录组分析为玉米种子低温萌发能力相关基因提供了新见解。
Plants (Basel). 2022 Mar 25;11(7):887. doi: 10.3390/plants11070887.
4
Quantitative Trait Locus Analysis of Seed Germination and Seedling Vigor in Brassica rapa Reveals QTL Hotspots and Epistatic Interactions.白菜种子萌发和幼苗活力的数量性状位点分析揭示了QTL热点和上位性相互作用。
Front Plant Sci. 2015 Dec 1;6:1032. doi: 10.3389/fpls.2015.01032. eCollection 2015.
5
Quantitative Trait Locus Analysis for Deep-Sowing Germination Ability in the Maize IBM Syn10 DH Population.玉米IBM Syn10 DH群体深播发芽能力的数量性状位点分析
Front Plant Sci. 2017 May 22;8:813. doi: 10.3389/fpls.2017.00813. eCollection 2017.
6
Comparison of QTL controlling seedling vigour under different temperature conditions using recombinant inbred lines in rice (Oryza sativa).利用水稻重组自交系比较不同温度条件下控制幼苗活力的QTL
Ann Bot. 2005 Feb;95(3):423-9. doi: 10.1093/aob/mci039. Epub 2004 Dec 1.
7
QTL-seq and transcriptomic integrative analyses reveal two positively regulated genes that control the low-temperature germination ability of MTP-maize introgression lines.QTL-seq 和转录组学综合分析揭示了两个正向调控基因,它们控制 MTP-玉米导入系的低温萌发能力。
Theor Appl Genet. 2023 Apr 24;136(5):116. doi: 10.1007/s00122-023-04362-6.
8
QTL controlling root and shoot traits of maize seedlings under cold stress.控制玉米幼苗在冷胁迫下根和地上部性状的数量性状基因座
Theor Appl Genet. 2004 Aug;109(3):618-29. doi: 10.1007/s00122-004-1665-1. Epub 2004 Jun 4.
9
Identification of candidate genes involved in salt stress response at germination and seedling stages by QTL mapping in upland cotton.利用 QTL 作图鉴定棉花发芽期和幼苗期耐盐相关候选基因。
G3 (Bethesda). 2022 May 30;12(6). doi: 10.1093/g3journal/jkac099.
10
Identification of chromosome regions associated with seedling vigor in rice.水稻中与幼苗活力相关的染色体区域的鉴定
Yi Chuan Xue Bao. 2004 Jun;31(6):596-603.

引用本文的文献

1
The Transcription Factor Gene Is Involved in a Variety of Abiotic Stresses in Maize ( L.).转录因子基因参与玉米(Zea mays L.)的多种非生物胁迫。
Plants (Basel). 2025 Jul 4;14(13):2054. doi: 10.3390/plants14132054.
2
Integrating Genetic Diversity and Agronomic Innovations for Climate-Resilient Maize Systems.整合遗传多样性与农艺创新,打造气候适应型玉米种植体系。
Plants (Basel). 2025 May 21;14(10):1552. doi: 10.3390/plants14101552.
3
Discovering new genes for alfalfa () growth and biomass resilience in combined salinity and infection through GWAS.

本文引用的文献

1
The ideal harvest time for seeds of hybrid maize (Zea mays L.) XY335 and ZD958 produced in multiple environments.多环境下杂交玉米 XY335 和 ZD958 种子的理想收获时间。
Sci Rep. 2017 Dec 13;7(1):17537. doi: 10.1038/s41598-017-16071-4.
2
The Synergistic Priming Effect of Exogenous Salicylic Acid and HO on Chilling Tolerance Enhancement during Maize ( L.) Seed Germination.外源水杨酸和过氧化氢对玉米种子萌发期间耐冷性增强的协同引发效应
Front Plant Sci. 2017 Jul 5;8:1153. doi: 10.3389/fpls.2017.01153. eCollection 2017.
3
Quantitative Trait Locus Analysis for Deep-Sowing Germination Ability in the Maize IBM Syn10 DH Population.
通过全基因组关联研究(GWAS)发现紫花苜蓿在盐度和感染综合条件下生长及生物量恢复力的新基因。
Front Plant Sci. 2024 May 2;15:1348168. doi: 10.3389/fpls.2024.1348168. eCollection 2024.
4
Sweet corn association panel and genome-wide association analysis reveal loci for chilling-tolerant germination.甜玉米关联面板和全基因组关联分析揭示了耐冷发芽的基因座。
Sci Rep. 2024 May 11;14(1):10791. doi: 10.1038/s41598-024-61797-7.
5
Identification of Multiple Genetic Loci Related to Low-Temperature Tolerance during Germination in Maize ( L.) through a Genome-Wide Association Study.通过全基因组关联研究鉴定玉米发芽期耐低温相关的多个遗传位点
Curr Issues Mol Biol. 2023 Nov 29;45(12):9634-9655. doi: 10.3390/cimb45120602.
6
Combined QTL mapping and RNA-Seq pro-filing reveal candidate genes related to low-temperature tolerance in maize.联合QTL定位和RNA测序分析揭示了玉米中与耐低温相关的候选基因。
Mol Breed. 2022 Jun 20;42(6):33. doi: 10.1007/s11032-022-01297-6. eCollection 2022 Jun.
7
Fine mapping of a QTL and identification of candidate genes associated with cold tolerance during germination in peanut ( L.) on chromosome B09 using whole genome re-sequencing.利用全基因组重测序对花生(Arachis hypogaea L.)B09染色体上与发芽期耐冷性相关的QTL进行精细定位并鉴定候选基因。
Front Plant Sci. 2023 May 8;14:1153293. doi: 10.3389/fpls.2023.1153293. eCollection 2023.
8
QTL-seq and transcriptomic integrative analyses reveal two positively regulated genes that control the low-temperature germination ability of MTP-maize introgression lines.QTL-seq 和转录组学综合分析揭示了两个正向调控基因,它们控制 MTP-玉米导入系的低温萌发能力。
Theor Appl Genet. 2023 Apr 24;136(5):116. doi: 10.1007/s00122-023-04362-6.
9
QTL Mapping and a Transcriptome Integrative Analysis Uncover the Candidate Genes That Control the Cold Tolerance of Maize Introgression Lines at the Seedling Stage.QTL 作图和转录组综合分析揭示控制玉米导入系苗期耐冷性的候选基因。
Int J Mol Sci. 2023 Jan 30;24(3):2629. doi: 10.3390/ijms24032629.
10
Using a high density bin map to analyze quantitative trait locis of germination ability of maize at low temperatures.利用高密度箱型图分析玉米低温发芽能力的数量性状位点。
Front Plant Sci. 2022 Aug 22;13:978941. doi: 10.3389/fpls.2022.978941. eCollection 2022.
玉米IBM Syn10 DH群体深播发芽能力的数量性状位点分析
Front Plant Sci. 2017 May 22;8:813. doi: 10.3389/fpls.2017.00813. eCollection 2017.
4
Genome-Wide Association Mapping Reveals Multiple QTLs Governing Tolerance Response for Seedling Stage Chilling Stress in Rice.全基因组关联图谱揭示了多个控制水稻苗期低温胁迫耐受性反应的数量性状位点。
Front Plant Sci. 2017 Apr 25;8:552. doi: 10.3389/fpls.2017.00552. eCollection 2017.
5
Natural variation in CTB4a enhances rice adaptation to cold habitats.CTB4a 的自然变异增强了水稻对寒冷生境的适应。
Nat Commun. 2017 Mar 23;8:14788. doi: 10.1038/ncomms14788.
6
Transcriptome Analysis of Chilling-Imbibed Embryo Revealed Membrane Recovery Related Genes in Maize.低温吸胀处理的玉米胚转录组分析揭示了与膜恢复相关的基因
Front Plant Sci. 2017 Jan 4;7:1978. doi: 10.3389/fpls.2016.01978. eCollection 2016.
7
Development of a multiple-hybrid population for genome-wide association studies: theoretical consideration and genetic mapping of flowering traits in maize.为全基因组关联研究开发多杂种群体:玉米开花性状的理论思考和遗传作图。
Sci Rep. 2017 Jan 10;7:40239. doi: 10.1038/srep40239.
8
Genetic dissection of seed vigour traits in maize (Zea mays L.) under low-temperature conditions.低温条件下玉米(Zea mays L.)种子活力性状的遗传剖析
J Genet. 2016 Dec;95(4):1017-1022. doi: 10.1007/s12041-016-0714-2.
9
Identification and Verification of QTL Associated with Frost Tolerance Using Linkage Mapping and GWAS in Winter Faba Bean.利用连锁图谱和全基因组关联研究在冬蚕豆中鉴定和验证与耐霜冻性相关的数量性状位点
Front Plant Sci. 2016 Aug 4;7:1098. doi: 10.3389/fpls.2016.01098. eCollection 2016.
10
Association mapping for cold tolerance in two large maize inbred panels.两个大型玉米自交系群体中耐冷性的关联分析
BMC Plant Biol. 2016 Jun 6;16(1):127. doi: 10.1186/s12870-016-0816-2.