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MALDI-TOF mass spectrometry provides high accuracy in identification of Salmonella at species level but is limited to type or subtype Salmonella serovars.基质辅助激光解吸电离飞行时间质谱在沙门氏菌属水平的鉴定中提供了高精度,但仅限于沙门氏菌血清型的分型或亚型鉴定。
Eur J Mass Spectrom (Chichester). 2017 Apr;23(2):70-82. doi: 10.1177/1469066717699216. Epub 2017 Mar 24.
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Identification of Methicillin-Resistant Staphylococcus aureus (MRSA) Using Simultaneous Detection of mecA, nuc, and femB by Loop-Mediated Isothermal Amplification (LAMP).通过环介导等温扩增(LAMP)同时检测mecA、nuc和femB基因鉴定耐甲氧西林金黄色葡萄球菌(MRSA)
Curr Microbiol. 2017 Aug;74(8):965-971. doi: 10.1007/s00284-017-1274-2. Epub 2017 Jun 2.
3
Development of a multiplex loop-mediated isothermal amplification method for the simultaneous detection of Salmonella spp. and Vibrio parahaemolyticus.建立一种多重环介导等温扩增方法同时检测沙门氏菌和副溶血性弧菌。
Sci Rep. 2017 Mar 28;7:45601. doi: 10.1038/srep45601.
4
A Basic Guide to Real Time PCR in Microbial Diagnostics: Definitions, Parameters, and Everything.微生物诊断中实时PCR基础指南:定义、参数及所有内容
Front Microbiol. 2017 Feb 2;8:108. doi: 10.3389/fmicb.2017.00108. eCollection 2017.
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Challenges and opportunities for whole-genome sequencing-based surveillance of antibiotic resistance.基于全基因组测序的抗生素耐药性监测的挑战与机遇。
Ann N Y Acad Sci. 2017 Jan;1388(1):108-120. doi: 10.1111/nyas.13310.
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Identification of bovine-associated coagulase-negative staphylococci by matrix-assisted laser desorption/ionization time-of-flight mass spectrometry using a direct transfer protocol.使用直接转移方案通过基质辅助激光解吸/电离飞行时间质谱法鉴定牛源凝固酶阴性葡萄球菌
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Prevalence and Characteristics of Isolated from Free-Range Chickens in Shandong Province, China.中国山东省散养鸡中分离出的[具体内容缺失,无法准确完整翻译]的流行情况及特征
Biomed Res Int. 2016;2016:8183931. doi: 10.1155/2016/8183931. Epub 2016 Oct 9.
8
A multiplex PCR for detection of Listeria monocytogenes and its lineages.一种用于检测单核细胞增生李斯特菌及其谱系的多重聚合酶链反应。
J Microbiol Methods. 2016 Nov;130:144-147. doi: 10.1016/j.mimet.2016.09.015. Epub 2016 Sep 23.
9
Matrix assisted laser desorption time of flight mass spectrometry (MALDI-TOF MS) in clinical microbiology.基质辅助激光解吸飞行时间质谱(MALDI-TOF MS)在临床微生物学中的应用
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Implementation of Salmonella serotype determination using pulsed-field gel electrophoresis in a state public health laboratory.在州公共卫生实验室中使用脉冲场凝胶电泳进行沙门氏菌血清型测定的实施情况。
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用于研究采前食品安全挑战的分子工具。

Molecular Tools To Study Preharvest Food Safety Challenges.

机构信息

Department of Veterinary Public Health & Epidemiology, College of Veterinary and Animal Sciences, Govind Ballabh Pant University of Agriculture & Technology, Pantnagar, Uttarakhand-263145, India.

Department of Population Health and Pathobiology, College of Veterinary Medicine, North Carolina State University, Raleigh, NC 27607.

出版信息

Microbiol Spectr. 2018 Feb;6(1). doi: 10.1128/microbiolspec.PFS-0019-2017.

DOI:10.1128/microbiolspec.PFS-0019-2017
PMID:29451114
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11633563/
Abstract

Preharvest food safety research and activities have advanced over time with the recognition of the importance and complicated nature of the preharvest phase of food production. In developed nations, implementation of preharvest food safety procedures along with strict monitoring and containment at various postharvest stages such as slaughter, processing, storage, and distribution have remarkably reduced the burden of foodborne pathogens in humans. Early detection and adequate surveillance of pathogens at the preharvest stage is of the utmost importance to ensure a safe meat supply. There is an urgent need to develop rapid, cost-effective, and point-of-care diagnostics which could be used at the preharvest stage and would complement postmortem and other quality checks performed at the postharvest stage. With newer methods and technologies, more efforts need to be directed toward developing rapid, sensitive, and specific methods for detection or screening of foodborne pathogens at the preharvest stage. In this review, we will discuss the molecular methods available for detection and molecular typing of bacterial foodborne pathogens at the farm. Such methods include conventional techniques such as endpoint PCR, real-time PCR, DNA microarray, and more advanced techniques such as matrix-assisted layer desorption ionization-time of flight mass spectrometry and whole-genome sequencing.

摘要

随着人们认识到食品生产收获前阶段的重要性和复杂性,收获前食品安全研究和活动也随之发展。在发达国家,通过实施收获前食品安全程序,并在屠宰、加工、储存和分销等各个收获后阶段进行严格监测和控制,大大降低了食源性病原体对人类的负担。早期在收获前阶段检测和充分监测病原体对于确保安全的肉类供应至关重要。因此,迫切需要开发快速、经济高效且可在现场使用的即时诊断检测方法,以补充收获后阶段进行的尸检和其他质量检查。随着新方法和技术的出现,需要更多地致力于开发用于在收获前阶段检测或筛选食源性病原体的快速、敏感和特异的方法。在这篇综述中,我们将讨论可用于在农场检测和分子分型细菌食源性病原体的分子方法。这些方法包括传统技术,如终点 PCR、实时 PCR、DNA 微阵列,以及更先进的技术,如基质辅助激光解吸电离飞行时间质谱和全基因组测序。