Niu Xinbin, Cui Weiguo, Cui Man, Zhang Xiaoxia, Zhang Shuqing, Xu Bingliang, Gao Miao
Biocontrol Engineering Laboratory of Crop Diseases and Pests of Gansu Province, College of Plant Protection, Gansu Agricultural University, Lanzhou 730070, PR China.
Key Laboratory of Microbial Resources Collection and Preservation, Ministry of Agriculture, Institute of Agricultural Resources and Regional Planning, Chinese Academy of Agricultural Sciences, Beijing 100081, PR China.
Int J Syst Evol Microbiol. 2018 Apr;68(4):1012-1017. doi: 10.1099/ijsem.0.002605. Epub 2018 Feb 9.
A Gram-stain-negative, non-motile, non-spore-forming bacterium, designated MLS-26-JM13-11, was isolated from potato stems, collected in Guyuan County, Hebei Province, China. Strain MLS-26-JM13-11 could grow at 10-39 °C (optimum, 30 °C), pH 6.0-9.0 (optimum, pH 7.2) and in the presence of 0-4.0 % (w/v) NaCl (optimum, 1.0 % w/v). Phylogenetic analysis, based on 16S rRNA gene sequences, revealed that strain MLS-26-JM13-11 formed a stable clade with Sphingobacterium bambusae IBFC2009 and Sphingobacterium griseoflavum SCU-B140, with the 16S rRNA gene sequence similarities ranging from 95.9 % to 97.0 %. The major cellular fatty acids comprised iso-C15 : 0 (36.9 %), summed feature 3 (C16 : 1ω7c and/or C16 : 1ω6c, 34.0 %), C16 : 0 (3.0 %) and iso-C17 : 0 3-OH (13.4 %). Strain MLS-26-JM13-11 contained sphingoglycolipid, phosphatidyl ethanolamine, six unknown lipids, one unknown aminolipid, four unknown polarlipids and two unknown aminophospholipids. The isoprenoid quinone was MK-7. The DNA G+C content was 42.6 mol%. Furthermore, the average nucleotide identity and in silico estimated DNA-DNA reassociation values among MLS-26-JM13-11 and S. bambusae KCTC 22814 were in all cases below the respective threshold for species differentiation. On the basis of phenotypic, genotypic and phylogenetic evidence, strain MLS-26-JM13-11 (=ACCC 60057=JCM 32274) represents a novel species within the genus Sphingobacterium, for which the name Sphingobacterium solani sp. nov. is proposed.
从中国河北省沽源县采集的马铃薯茎中分离出一株革兰氏染色阴性、无运动性、不形成芽孢的细菌,命名为MLS-26-JM13-11。菌株MLS-26-JM13-11能在10-39 °C(最适温度为30 °C)、pH 6.0-9.0(最适pH为7.2)以及0-4.0 %(w/v)NaCl(最适浓度为1.0 % w/v)条件下生长。基于16S rRNA基因序列的系统发育分析表明,菌株MLS-26-JM13-11与竹鞘氨醇杆菌IBFC2009和灰黄鞘氨醇杆菌SCU-B140形成一个稳定的进化分支,16S rRNA基因序列相似性在95.9 %至97.0 %之间。主要细胞脂肪酸包括异-C15 : 0(36.9 %)、特征性总和3(C16 : 1ω7c和/或C16 : 1ω6c,34.0 %)、C16 : 0(3.0 %)和异-C17 : 0 3-OH(13.4 %)。菌株MLS-26-JM13-11含有鞘糖脂、磷脂酰乙醇胺、六种未知脂质、一种未知氨基脂质、四种未知极性脂质和两种未知氨基磷脂。类异戊二烯醌为MK-7。DNA G+C含量为42.6 mol%。此外,MLS-26-JM13-11与竹鞘氨醇杆菌KCTC 22814之间的平均核苷酸一致性和电子计算机估计的DNA-DNA杂交值均低于各自的种间区分阈值。基于表型、基因型和系统发育证据,菌株MLS-26-JM13-11(=ACCC 60057=JCM 32274)代表鞘氨醇杆菌属内的一个新物种,为此提出新名称茄鞘氨醇杆菌(Sphingobacterium solani sp. nov.)。