Dipartimento di Chimica Industriale "Toso Montanari", Università di Bologna, Viale del Risorgimento 4, I-40136 Bologna, Italy.
Phys Chem Chem Phys. 2018 Mar 7;20(10):6877-6890. doi: 10.1039/c7cp08235e.
The most relevant 'dark' electronic excited states in DNA/RNA pyrimidine nucleosides are mapped in water employing hybrid MS-CASPT2/MM optimisations with explicit solvation and including the sugar. Conical intersections (CIs) between initially accessed bright ππ* and the lowest energy dark nπ* excited states, involving the lone pair localised on the oxygen and/or nitrogen atoms are characterised. They are found in the vicinities of the Franck-Condon (FC) region and are shown to facilitate non-adiabatic population transfer. The excited state population of the nπ* state, localised in the carbonyl moiety on all pyrimidine nucleosides, is predicted to rapidly evolve to its minimum, displaying non-negligible potential energy barriers along its non-radiative decay, and accounting for the ps signal registered in pump-probe experiments as well as for an efficient population of the triplet state. Cytidine displays an additional nπ* state localised in the N3 atom and that leads to its excited state minimum displaying large potential energy barriers in the pathway connecting to the CI with the ground state. Sugar-to-base hydrogen/proton transfer processes are assessed in solution for the first time, displaying a sizable barrier along its decay and thus being competitive with other slow decay channels in the ps and ns timescales. A unified deactivation scheme for the long-lived channels of pyrimidine nucleosides is delivered, where the nπ* state is found to mediate the long-lived decay in the singlet manifold and act as the doorway for triplet population and thus accounting for the recorded phosphorescence and, more generally, for the transient/photoelectron spectral signals registered up to the ns timescale.
在水中,采用杂交 MS-CASPT2/MM 优化方法,结合显式溶剂化和糖部分,对 DNA/RNA 嘧啶核苷中最相关的“暗”电子激发态进行了定位。描述了最初访问的亮 ππ和最低能量暗 nπ激发态之间的锥形交叉(CI),涉及局域在氧和/或氮原子上的孤对。它们位于 Franck-Condon(FC)区域附近,被证明可以促进非绝热布居转移。nπ态的激发态布居,局域在所有嘧啶核苷的羰基部分,被预测会迅速演化到其最小值,沿其非辐射衰变显示出不可忽略的势能垒,并解释了泵浦-探测实验中记录的 ps 信号以及三重态的有效布居。胞嘧啶显示出另一个局域在 N3 原子上的 nπ态,这导致其激发态最小值在与基态的 CI 连接的路径上显示出大的势能垒。首次在溶液中评估了糖-碱基氢/质子转移过程,显示出沿其衰变的相当大的势垒,因此与 ps 和 ns 时间尺度内的其他慢衰变通道竞争。为嘧啶核苷的长寿命通道提供了一个统一的失活方案,其中 nπ*态被发现介导单重态中的长寿命衰减,并作为三重态布居的入口,从而解释了记录的磷光,更一般地,解释了直到 ns 时间尺度记录的瞬态/光电子光谱信号。