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时空混合模型评估环境和社会经济因素对手足口病发病率的影响。

A spatiotemporal mixed model to assess the influence of environmental and socioeconomic factors on the incidence of hand, foot and mouth disease.

机构信息

LREIS, Institute of Geographical Sciences and Natural Resources Research, Chinese Academy of Sciences, Beijing, China.

University of Chinese Academy of Sciences, Beijing, 10049, China.

出版信息

BMC Public Health. 2018 Feb 20;18(1):274. doi: 10.1186/s12889-018-5169-3.

Abstract

BACKGROUND

As a common infectious disease, hand, foot and mouth disease (HFMD) is affected by multiple environmental and socioeconomic factors, and its pathogenesis is complex. Furthermore, the transmission of HFMD is characterized by strong spatial clustering and autocorrelation, and the classical statistical approach may be biased without consideration of spatial autocorrelation. In this paper, we propose to embed spatial characteristics into a spatiotemporal additive model to improve HFMD incidence assessment.

METHODS

Using incidence data (6439 samples from 137 monitoring district) for Shandong Province, China, along with meteorological, environmental and socioeconomic spatial and spatiotemporal covariate data, we proposed a spatiotemporal mixed model to estimate HFMD incidence. Geo-additive regression was used to model the non-linear effects of the covariates on the incidence risk of HFMD in univariate and multivariate models. Furthermore, the spatial effect was constructed to capture spatial autocorrelation at the sub-regional scale, and clusters (hotspots of high risk) were generated using spatiotemporal scanning statistics as a predictor. Linear and non-linear effects were compared to illustrate the usefulness of non-linear associations. Patterns of spatial effects and clusters were explored to illustrate the variation of the HFMD incidence across geographical sub-regions. To validate our approach, 10-fold cross-validation was conducted.

RESULTS

The results showed that there were significant non-linear associations of the temporal index, spatiotemporal meteorological factors and spatial environmental and socioeconomic factors with HFMD incidence. Furthermore, there were strong spatial autocorrelation and clusters for the HFMD incidence. Spatiotemporal meteorological parameters, the normalized difference vegetation index (NDVI), the temporal index, spatiotemporal clustering and spatial effects played important roles as predictors in the multivariate models. Efron's cross-validation R of 0.83 was acquired using our approach. The spatial effect accounted for 23% of the R, and notable patterns of the posterior spatial effect were captured.

CONCLUSIONS

We developed a geo-additive mixed spatiotemporal model to assess the influence of meteorological, environmental and socioeconomic factors on HFMD incidence and explored spatiotemporal patterns of such incidence. Our approach achieved a competitive performance in cross-validation and revealed strong spatial patterns for the HFMD incidence rate, illustrating important implications for the epidemiology of HFMD.

摘要

背景

手足口病(HFMD)作为一种常见的传染病,受到多种环境和社会经济因素的影响,其发病机制较为复杂。此外,手足口病的传播具有较强的空间聚集性和自相关性,如果不考虑空间自相关性,经典的统计方法可能存在偏差。本文提出将空间特征嵌入时空附加模型中,以提高手足口病发病率的评估效果。

方法

利用中国山东省的发病率数据(来自 137 个监测区的 6439 个样本)以及气象、环境和社会经济的空间和时空协变量数据,提出了一种时空混合模型来估计手足口病的发病率。地理附加回归用于在单变量和多变量模型中对手足口病发病率的协变量的非线性效应进行建模。此外,构建空间效应以捕捉亚区尺度的空间自相关性,并使用时空扫描统计作为预测因子生成热点高风险聚类。比较线性和非线性效应,以说明非线性关联的有用性。探索空间效应和聚类的模式,以说明地理亚区之间手足口病发病率的变化。为了验证我们的方法,进行了 10 折交叉验证。

结果

结果表明,时间指数、时空气象因素以及空间环境和社会经济因素与手足口病发病率之间存在显著的非线性关联。此外,手足口病发病率存在较强的空间自相关性和聚类。时空气象参数、归一化植被指数(NDVI)、时间指数、时空聚类和空间效应在多变量模型中作为预测因子发挥了重要作用。我们的方法获得了 0.83 的 Efron 交叉验证 R。空间效应占 R 的 23%,并捕捉到了显著的后验空间效应模式。

结论

我们开发了一种地理附加混合时空模型来评估气象、环境和社会经济因素对手足口病发病率的影响,并探索了手足口病发病率的时空模式。我们的方法在交叉验证中表现出了有竞争力的性能,并揭示了手足口病发病率的强烈空间模式,对手足口病的流行病学具有重要意义。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6b92/5819665/d37564c482a1/12889_2018_5169_Fig1_HTML.jpg

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