• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利：CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法，用中文像聊天一样搜索，搜遍4000万医学文献。AI智能推荐，让科研检索更轻松。

立即免费搜索

文件翻译

保留排版，准确专业，支持PDF/Word/PPT等文件格式，支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述，25分钟生成高质量综述，智能提取关键信息，辅助科研写作。

立即免费体验

来自日本霞浦湖的形成水华的蓝藻铜绿微囊藻NIES-87的基因组序列草图

Draft Genome Sequence of Microcystis aeruginosa NIES-87, a Bloom-Forming Cyanobacterium from Lake Kasumigaura, Japan.

作者信息

Yamaguchi Haruyo, Suzuki Shigekatsu, Kawachi Masanobu

机构信息

Center for Environmental Biology and Ecosystem Studies, National Institute for Environmental Studies, Ibaraki, Japan

Center for Environmental Biology and Ecosystem Studies, National Institute for Environmental Studies, Ibaraki, Japan.

出版信息

Genome Announc. 2018 Feb 22;6(8):e01596-17. doi: 10.1128/genomeA.01596-17.

DOI:10.1128/genomeA.01596-17
PMID:29472345
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC5823997/
Abstract

is a problematic cyanobacterium in freshwater lakes distributed worldwide. Here, we report the draft genome sequence of NIES-87, isolated from Lake Kasumigaura, Japan. The genome is approximately 4.9 Mb in size, with an average G+C content of 42.9% and 4,355 predicted protein-coding genes.

摘要

是一种分布于全球淡水湖中的有问题的蓝细菌。在此，我们报告从日本霞浦湖分离出的NIES-87的基因组草图序列。该基因组大小约为4.9 Mb，平均G+C含量为42.9%，预测有4355个蛋白质编码基因。

相似文献

1
Draft Genome Sequence of Microcystis aeruginosa NIES-87, a Bloom-Forming Cyanobacterium from Lake Kasumigaura, Japan.来自日本霞浦湖的形成水华的蓝藻铜绿微囊藻NIES-87的基因组序列草图
Genome Announc. 2018 Feb 22;6(8):e01596-17. doi: 10.1128/genomeA.01596-17.
2
Improved Draft Genome Sequence of NIES-298, a Microcystin-Producing Cyanobacterium from Lake Kasumigaura, Japan.日本霞浦湖产微囊藻毒素蓝藻NIES-298的改进基因组序列草图
Genome Announc. 2018 Feb 1;6(5):e01551-17. doi: 10.1128/genomeA.01551-17.
3
Draft Genome Sequence of Microcystis aeruginosa NIES-98, a Non-Microcystin-Producing Cyanobacterium from Lake Kasumigaura, Japan.日本霞浦湖非产微囊藻毒素蓝藻——铜绿微囊藻NIES-98的基因组序列草图
Genome Announc. 2016 Nov 10;4(6):e01187-16. doi: 10.1128/genomeA.01187-16.
4
Complete Genome Sequence of Microcystis aeruginosa NIES-2549, a Bloom-Forming Cyanobacterium from Lake Kasumigaura, Japan.来自日本霞浦湖的形成水华的蓝藻——铜绿微囊藻NIES-2549的全基因组序列
Genome Announc. 2015 May 28;3(3):e00551-15. doi: 10.1128/genomeA.00551-15.
5
Draft Genome Sequences of Four Microcystis aeruginosa Strains (NIES-3787, NIES-3804, NIES-3806, and NIES-3807) Isolated from Lake Kasumigaura, Japan.从日本霞浦湖分离出的四株铜绿微囊藻（NIES-3787、NIES-3804、NIES-3806和NIES-3807）的基因组序列草图
Microbiol Resour Announc. 2020 Apr 2;9(14):e00052-20. doi: 10.1128/MRA.00052-20.
6
Complete Genome Sequence of NIES-2481 and Common Genomic Features of Group G .NIES-2481的全基因组序列及G组的常见基因组特征
J Genomics. 2018 Mar 19;6:30-33. doi: 10.7150/jgen.24935. eCollection 2018.
7
Genomic Characteristics of the Toxic Bloom-Forming Cyanobacterium NIES-102.形成有毒水华的蓝藻细菌NIES-102的基因组特征
J Genomics. 2020 Jan 1;8:1-6. doi: 10.7150/jgen.40978. eCollection 2020.
8
Draft Genome Sequence of Microcystis aeruginosa NIES-4285, Isolated from Brackish Water (Lake Abashiri, Japan).从半咸水（日本阿寒湖）分离出的铜绿微囊藻NIES-4285的基因组序列草图
Microbiol Resour Announc. 2019 Feb 7;8(6). doi: 10.1128/MRA.00001-19. eCollection 2019 Feb.
9
A novel salt-tolerant genotype illuminates the sucrose gene evolution in freshwater bloom-forming cyanobacterium Microcystis aeruginosa.一种新型耐盐基因型揭示了淡水水华形成蓝藻铜绿微囊藻中蔗糖基因的进化。
FEMS Microbiol Lett. 2019 Aug 1;366(15). doi: 10.1093/femsle/fnz190.
10
Draft genome database construction from four strains (NIES-298, FCY- 26, -27, and -28) of the cyanobacterium Microcystis aeruginosa.Draft 基因组数据库构建自 4 株铜绿微囊藻（NIES-298、FCY-26、-27 和 -28）。
J Microbiol Biotechnol. 2012 Sep;22(9):1208-13. doi: 10.4014/jmb.1112.12034.

引用本文的文献

1
Distribution of the Harmful Bloom-Forming Cyanobacterium, Microcystis aeruginosa, in 88 Freshwater Environments across Japan.日本 88 个淡水环境中有害蓝藻水华形成蓝藻——铜绿微囊藻的分布。
Microbes Environ. 2020;35(1). doi: 10.1264/jsme2.ME19110.
2
Genomic Characteristics of the Toxic Bloom-Forming Cyanobacterium NIES-102.形成有毒水华的蓝藻细菌NIES-102的基因组特征
J Genomics. 2020 Jan 1;8:1-6. doi: 10.7150/jgen.40978. eCollection 2020.

本文引用的文献

1
DFAST: a flexible prokaryotic genome annotation pipeline for faster genome publication.DFAST：一个灵活的原核生物基因组注释管道，用于更快地发布基因组。
Bioinformatics. 2018 Mar 15;34(6):1037-1039. doi: 10.1093/bioinformatics/btx713.
2
OrthoFinder: solving fundamental biases in whole genome comparisons dramatically improves orthogroup inference accuracy.OrthoFinder：解决全基因组比较中的基本偏差可显著提高直系同源组推断准确性。
Genome Biol. 2015 Aug 6;16(1):157. doi: 10.1186/s13059-015-0721-2.
3
antiSMASH 3.0-a comprehensive resource for the genome mining of biosynthetic gene clusters.antiSMASH 3.0——用于生物合成基因簇基因组挖掘的综合资源。
Nucleic Acids Res. 2015 Jul 1;43(W1):W237-43. doi: 10.1093/nar/gkv437. Epub 2015 May 6.
4
Trimmomatic: a flexible trimmer for Illumina sequence data.Trimmomatic：一款适用于 Illumina 测序数据的灵活修剪工具。
Bioinformatics. 2014 Aug 1;30(15):2114-20. doi: 10.1093/bioinformatics/btu170. Epub 2014 Apr 1.
5
SPAdes: a new genome assembly algorithm and its applications to single-cell sequencing.SPAdes：一种新的基因组组装算法及其在单细胞测序中的应用
J Comput Biol. 2012 May;19(5):455-77. doi: 10.1089/cmb.2012.0021. Epub 2012 Apr 16.
6
Local expansion of a panmictic lineage of water bloom-forming cyanobacterium Microcystis aeruginosa.水华蓝藻鱼腥藻泛种群系的局部扩张。
PLoS One. 2011 Feb 24;6(2):e17085. doi: 10.1371/journal.pone.0017085.
7
Kasumigamide, an antialgal peptide from the cyanobacterium Microcystis aeruginosa.微囊藻毒素，一种来自铜绿微囊藻的抗藻肽。
J Org Chem. 2000 Sep 22;65(19):5898-900. doi: 10.1021/jo991918f.
8
Structural organization of a cryptic plasmid, pMA1, from Microcystis aeruginosa f. aeruginosa Kützing.
Biosci Biotechnol Biochem. 1993 Sep;57(9):1503-7. doi: 10.1271/bbb.57.1503.