Oprea Tudor I, Bologa Cristian G, Brunak Søren, Campbell Allen, Gan Gregory N, Gaulton Anna, Gomez Shawn M, Guha Rajarshi, Hersey Anne, Holmes Jayme, Jadhav Ajit, Jensen Lars Juhl, Johnson Gary L, Karlson Anneli, Leach Andrew R, Ma'ayan Avi, Malovannaya Anna, Mani Subramani, Mathias Stephen L, McManus Michael T, Meehan Terrence F, von Mering Christian, Muthas Daniel, Nguyen Dac-Trung, Overington John P, Papadatos George, Qin Jun, Reich Christian, Roth Bryan L, Schürer Stephan C, Simeonov Anton, Sklar Larry A, Southall Noel, Tomita Susumu, Tudose Ilinca, Ursu Oleg, Vidovic Dušica, Waller Anna, Westergaard David, Yang Jeremy J, Zahoránszky-Köhalmi Gergely
Department of Internal Medicine, University of New Mexico School of Medicine, Albuquerque, NM, USA.
UNM Comprehensive Cancer Center, Albuquerque, NM, USA.
Nat Rev Drug Discov. 2018 May;17(5):317-332. doi: 10.1038/nrd.2018.14. Epub 2018 Mar 23.
A large proportion of biomedical research and the development of therapeutics is focused on a small fraction of the human genome. In a strategic effort to map the knowledge gaps around proteins encoded by the human genome and to promote the exploration of currently understudied, but potentially druggable, proteins, the US National Institutes of Health launched the Illuminating the Druggable Genome (IDG) initiative in 2014. In this article, we discuss how the systematic collection and processing of a wide array of genomic, proteomic, chemical and disease-related resource data by the IDG Knowledge Management Center have enabled the development of evidence-based criteria for tracking the target development level (TDL) of human proteins, which indicates a substantial knowledge deficit for approximately one out of three proteins in the human proteome. We then present spotlights on the TDL categories as well as key drug target classes, including G protein-coupled receptors, protein kinases and ion channels, which illustrate the nature of the unexplored opportunities for biomedical research and therapeutic development.
大部分生物医学研究和治疗方法的开发都集中在人类基因组的一小部分上。为了战略性地梳理围绕人类基因组编码蛋白质的知识空白,并推动对目前研究不足但具有潜在成药潜力的蛋白质进行探索,美国国立卫生研究院于2014年发起了“照亮可药物基因组”(IDG)计划。在本文中,我们讨论了IDG知识管理中心如何通过系统收集和处理大量基因组、蛋白质组、化学和疾病相关资源数据,制定了基于证据的标准来追踪人类蛋白质的靶点开发水平(TDL),这表明人类蛋白质组中约三分之一的蛋白质存在重大知识缺口。然后,我们重点介绍了TDL类别以及关键药物靶点类别,包括G蛋白偶联受体、蛋白激酶和离子通道,这些类别说明了生物医学研究和治疗开发中未被探索机会的性质。