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红平红球菌中谷胱甘肽依赖型苯乙烯降解之谜

On the Enigma of Glutathione-Dependent Styrene Degradation in Gordonia rubripertincta CWB2.

机构信息

Institute of Biosciences, TU Bergakademie Freiberg, Freiberg, Germany

Institute of Biosciences, TU Bergakademie Freiberg, Freiberg, Germany.

出版信息

Appl Environ Microbiol. 2018 Apr 16;84(9). doi: 10.1128/AEM.00154-18. Print 2018 May 1.

Abstract

Among bacteria, only a single styrene-specific degradation pathway has been reported so far. It comprises the activity of styrene monooxygenase, styrene oxide isomerase, and phenylacetaldehyde dehydrogenase, yielding phenylacetic acid as the central metabolite. The alternative route comprises ring-hydroxylating enzymes and yields vinyl catechol as central metabolite, which undergoes -cleavage. This was reported to be unspecific and also allows the degradation of benzene derivatives. However, some bacteria had been described to degrade styrene but do not employ one of those routes or only parts of them. Here, we describe a novel "hybrid" degradation pathway for styrene located on a plasmid of foreign origin. As putatively also unspecific, it allows metabolizing chemically analogous compounds (e.g., halogenated and/or alkylated styrene derivatives). CWB2 was isolated with styrene as the sole source of carbon and energy. It employs an assembled route of the styrene side-chain degradation and isoprene degradation pathways that also funnels into phenylacetic acid as the central metabolite. Metabolites, enzyme activity, genome, transcriptome, and proteome data reinforce this observation and allow us to understand this biotechnologically relevant pathway, which can be used for the production of ibuprofen. The degradation of xenobiotics by bacteria is not only important for bioremediation but also because the involved enzymes are potential catalysts in biotechnological applications. This study reveals a novel degradation pathway for the hazardous organic compound styrene in CWB2. This study provides an impressive illustration of horizontal gene transfer, which enables novel metabolic capabilities. This study presents glutathione-dependent styrene metabolization in an (actino-)bacterium. Further, the genomic background of the ability of strain CWB2 to produce ibuprofen is demonstrated.

摘要

在细菌中,迄今为止仅报道了一种单一的苯乙烯特异性降解途径。它包括苯乙烯单加氧酶、苯乙烯氧化物异构酶和苯乙醛脱氢酶的活性,生成苯乙酸作为中心代谢物。替代途径包括环羟化酶,生成中心代谢物 vinyl catechol,其经历β-裂解。据报道,这种途径是不特异的,也允许降解苯的衍生物。然而,已经有一些细菌被描述为降解苯乙烯,但不采用这些途径中的任何一种或仅采用其中的一部分。在这里,我们描述了一种位于外来质粒上的新型“混合”苯乙烯降解途径。由于据称也是非特异性的,它允许代谢化学上类似的化合物(例如,卤化和/或烷基化的苯乙烯衍生物)。CWB2 是使用苯乙烯作为唯一的碳源和能源分离得到的。它采用苯乙烯侧链降解途径和异戊二烯降解途径的组合途径,也将其代谢物汇集到苯乙酸作为中心代谢物。代谢物、酶活性、基因组、转录组和蛋白质组数据证实了这一观察结果,并使我们能够理解这一具有生物技术相关性的途径,该途径可用于生产布洛芬。细菌对外源化合物的降解不仅对生物修复很重要,而且因为涉及的酶是生物技术应用中的潜在催化剂。本研究揭示了 CWB2 中一种新型的危险有机化合物苯乙烯降解途径。本研究提供了一个令人印象深刻的水平基因转移的例证,它使新的代谢能力成为可能。本研究在(放线)细菌中展示了谷胱甘肽依赖的苯乙烯代谢。此外,还证明了 CWB2 菌株产生布洛芬的能力的基因组背景。

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