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本文引用的文献

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Theory of fluorescence correlation spectroscopy at variable observation area for two-dimensional diffusion on a meshgrid.用于网格上二维扩散的可变观测区域荧光相关光谱理论。
Soft Matter. 2008 May 14;4(6):1288-1301. doi: 10.1039/b718583a.
2
Spatiotemporal Image Correlation Analysis for 3D Flow Field Mapping in Microfluidic Devices.用于微流控设备中 3D 流场映射的时空图像相关分析。
Anal Chem. 2018 Feb 6;90(3):2277-2284. doi: 10.1021/acs.analchem.7b04641. Epub 2018 Jan 10.
3
Single plane illumination microscopy as a tool for studying nucleome dynamics.单平面照明显微镜作为研究核基因组动态的工具。
Methods. 2017 Jul 1;123:3-10. doi: 10.1016/j.ymeth.2017.06.021. Epub 2017 Jun 23.
4
Spatiotemporal mapping of diffusion dynamics and organization in plasma membranes.血浆膜中扩散动力学和组织的时空映射。
Methods Appl Fluoresc. 2016 Jul 26;4(3):034003. doi: 10.1088/2050-6120/4/3/034003.
5
Manipulation and Motion of Organelles and Single Molecules in Living Cells.细胞器和活细胞中单分子的操纵和运动。
Chem Rev. 2017 Mar 8;117(5):4342-4375. doi: 10.1021/acs.chemrev.6b00638. Epub 2017 Feb 3.
6
Cytoplasmic RNA-Protein Particles Exhibit Non-Gaussian Subdiffusive Behavior.细胞质RNA-蛋白质颗粒表现出非高斯亚扩散行为。
Biophys J. 2017 Feb 7;112(3):532-542. doi: 10.1016/j.bpj.2016.11.3208. Epub 2017 Jan 11.
7
What information is contained in the fluorescence correlation spectroscopy curves, and where.荧光相关光谱曲线中包含哪些信息,以及这些信息在哪里。
Phys Rev E. 2016 Aug;94(2-1):022407. doi: 10.1103/PhysRevE.94.022407. Epub 2016 Aug 9.
8
Characterizing anomalous diffusion in crowded polymer solutions and gels over five decades in time with variable-lengthscale fluorescence correlation spectroscopy.用变尺度荧光相关光谱技术对过去五十年中聚合物溶液和凝胶中的拥挤体系中的异常扩散进行时间分辨研究。
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9
An Intermittent Model for Intracellular Motions of Gold Nanostars by k-Space Scattering Image Correlation.通过k空间散射图像相关性建立的金纳米星细胞内运动的间歇性模型。
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10
Imaging fluorescence (cross-) correlation spectroscopy in live cells and organisms.活细胞和生物体内的荧光(互)关联光谱成像。
Nat Protoc. 2015 Dec;10(12):1948-74. doi: 10.1038/nprot.2015.100. Epub 2015 Nov 5.

从随机性中产生:生物系统中的噪声关联。

Out of the Randomness: Correlating Noise in Biological Systems.

机构信息

Dipartimento di Fisica e Centro di Nanomedicina, Università degli Studi di Milano-Bicocca, Milan, Italy; CNR-ISASI, Center for Complex Systems, Pozzuoli, Italy.

Dipartimento di Fisica e Centro di Nanomedicina, Università degli Studi di Milano-Bicocca, Milan, Italy.

出版信息

Biophys J. 2018 May 22;114(10):2298-2307. doi: 10.1016/j.bpj.2018.01.034. Epub 2018 Feb 21.

DOI:10.1016/j.bpj.2018.01.034
PMID:29477335
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC6129560/
Abstract

The study of the dynamics of biological systems requires one to follow relaxation processes in time with micron-size spatial resolution. This need has led to the development of different fluorescence correlation techniques with high spatial resolution and a tremendous (from nanoseconds to seconds) temporal dynamic range. Spatiotemporal information can be obtained even on complex dynamic processes whose time evolution is not forecast by simple Brownian diffusion. Our discussion of the most recent applications of image correlation spectroscopy to the study of anomalous sub- or superdiffusion suggests that this field still requires the development of multidimensional image analyses based on analytical models or numerical simulations. We focus in particular on the framework of spatiotemporal image correlation spectroscopy and examine the critical steps in getting information on anomalous diffusive processes from the correlation maps. We point out how a dual space-time correlative analysis, in both the direct and the Fourier space, can provide quantitative information on superdiffusional processes when these are analyzed through an empirical model based on intermittent active dynamics. We believe that this dual space-time analysis, potentially amenable to mathematical treatment and to the exact fit of experimental data, could be extended to include the rich phenomenology of subdiffusive processes, thereby quantifying relevant parameters for the various motivating biological problems of interest.

摘要

研究生物系统的动力学需要人们能够以微米级的空间分辨率随时间跟踪弛豫过程。这种需求导致了不同荧光相关技术的发展,这些技术具有高空间分辨率和巨大的(从纳秒到秒)时间动态范围。即使对于时间演化不能简单地用布朗扩散来预测的复杂动态过程,也可以获得时空信息。我们讨论了图像相关光谱学在研究异常亚扩散或超扩散方面的最新应用,这表明该领域仍然需要基于分析模型或数值模拟的多维图像分析的发展。我们特别关注时空图像相关光谱学的框架,并研究了从相关图中获取关于异常扩散过程的信息的关键步骤。我们指出,当通过基于间歇活动动力学的经验模型对超扩散过程进行分析时,在直接和傅里叶空间中的双时空相关分析如何能够提供有关超扩散过程的定量信息。我们相信,这种双时空分析可以扩展到包括亚扩散过程丰富的现象学,从而量化各种相关生物学问题的感兴趣的参数。