Department of Biotechnology, Korea University Graduate School, Seoul, Korea.
Korea Research Institute of Chemical Technology, Center for Eco-Friendly New Materials, Daejeon, Seoul, Korea.
J Antibiot (Tokyo). 2018 May;71(5):495-505. doi: 10.1038/s41429-017-0023-x. Epub 2018 Feb 26.
Hahella chejuensis MB-1084 is a Gram-negative marine bacterial strain that produces unusual 17-membered carbocyclic tetraenes, chejuenolide A and B. Two fosmid clones responsible for chejuenolide production were identified from the genomic DNA library of the MB-1084 strain. Systematic inactivation of the open reading frames (ORFs) in the sequenced region defines the boundaries of the chejuenolide (che) biosynthetic gene cluster (24.9 kbp) that encodes one non-ribosomal peptide synthase (NRPS)-polyketide synthase (PKS) hybrid protein, three modular PKSs, two PKS domains, and an amine oxidase homolog. Based on the results, we found that the che PKSs have non-canonical features such as trans-AT system and insufficient number of KS domains (five KS domains) for chejuenolide production (requires eight rounds of Claisen condensation reaction). Heterologous expression of the che PKSs in the E. coli BAP1 strain provides strong evidence of the iterative characteristic of the modular PKSs. Additionally, the phylogenetic relatedness of the KS domains of che PKSs and other trans-AT PKSs was analyzed to propose a possible pathway for chejuenolide biosynthesis.
来自海洋的革兰氏阴性细菌菌株——清酒海杆菌 MB-1084 能够产生不寻常的 17 元碳环四烯类化合物,即清酒烯内酯 A 和 B。从 MB-1084 菌株的基因组 DNA 文库中鉴定出两个负责生产清酒烯内酯的 fosmid 克隆。对测序区域中开放阅读框(ORFs)的系统失活定义了清酒烯内酯(che)生物合成基因簇(24.9 kbp)的边界,该基因簇编码一个非核糖体肽合酶(NRPS)-聚酮合酶(PKS)杂合蛋白、三个模块化 PKSs、两个 PKS 结构域和一个胺氧化酶同源物。根据结果,我们发现 che PKSs 具有非典型特征,例如跨 AT 系统和用于生产清酒烯内酯的 KS 结构域数量不足(需要八轮 Claisen 缩合反应)(需要 8 轮 Claisen 缩合反应)。在大肠杆菌 BAP1 菌株中异源表达 che PKSs 为模块化 PKSs 的迭代特征提供了有力证据。此外,还分析了 che PKSs 的 KS 结构域与其他跨 AT PKSs 的系统发育关系,提出了清酒烯内酯生物合成的可能途径。