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基于 SkinSensDB 的机制信息读交叉评估皮肤致敏物。

Mechanism-informed read-across assessment of skin sensitizers based on SkinSensDB.

机构信息

School of Pharmacy, Kaohsiung Medical University, Kaohsiung 80708, Taiwan; PhD Program in Toxicology, Kaohsiung Medical University, Kaohsiung 80708, Taiwan; Department of Medical Research, Kaohsiung Medical University Hospital, Kaohsiung 80708, Taiwan; National Institute of Environmental Health Sciences, National Health Research Institutes, Miaoli County 35053, Taiwan.

School of Pharmacy, Kaohsiung Medical University, Kaohsiung 80708, Taiwan; PhD Program in Toxicology, Kaohsiung Medical University, Kaohsiung 80708, Taiwan; Department of Medical Research, Kaohsiung Medical University Hospital, Kaohsiung 80708, Taiwan; National Institute of Environmental Health Sciences, National Health Research Institutes, Miaoli County 35053, Taiwan.

出版信息

Regul Toxicol Pharmacol. 2018 Apr;94:276-282. doi: 10.1016/j.yrtph.2018.02.014. Epub 2018 Feb 24.

Abstract

Integrative testing strategies using adverse outcome pathway (AOP)-based alternative assays for assessing skin sensitizers show the potential for replacing animal testing. However, the application of alternative assays for a large number of chemicals is still time-consuming and expensive. In order to facilitate the assessment of skin sensitizers based on integrative testing strategies, a mechanism-informed read-across assessment method was proposed and evaluated using data from SkinSensDB. First, the prediction performance of two integrated testing strategy models was evaluated giving the highest area under the receiver operating characteristic curve (AUC) values of 0.928 and 0.837 for predicting human and LLNA data, respectively. The proposed read-across prediction method achieves AUC values of 0.957 and 0.802 for predicting human and LLNA data, respectively, with interpretable activation statuses of AOP events. As data grows, a better prediction performance is expected. A user-friendly tool has been constructed and integrated into SkinSensDB that is publicly accessible at http://cwtung.kmu.edu.tw/skinsensdb.

摘要

基于不良结局途径(AOP)的整合测试策略,利用替代检测方法评估皮肤致敏物,显示出替代动物测试的潜力。然而,对于大量化学品,替代检测的应用仍然是耗时且昂贵的。为了促进基于整合测试策略的皮肤致敏物评估,提出了一种基于机制的读通评估方法,并使用来自 SkinSensDB 的数据进行了评估。首先,评估了两种综合测试策略模型的预测性能,分别给出了预测人体和 LLNA 数据的最高受试者工作特征曲线(AUC)值为 0.928 和 0.837。所提出的读通预测方法分别对人体和 LLNA 数据的 AUC 值达到 0.957 和 0.802,具有可解释的 AOP 事件激活状态。随着数据的增长,预计会有更好的预测性能。已经构建了一个用户友好的工具,并将其集成到可公开访问的 http://cwtung.kmu.edu.tw/skinsensdb 中的 SkinSensDB 中。

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