From the ‡University of Washington, Seattle, Washington 98195.
§LabKey, San Diego, California 92101.
Mol Cell Proteomics. 2018 Jun;17(6):1239-1244. doi: 10.1074/mcp.RA117.000543. Epub 2018 Feb 27.
To address the growing need for a centralized, community resource of published results processed with Skyline, and to provide reviewers and readers immediate visual access to the data behind published conclusions, we present Panorama Public (https://panoramaweb.org/public.url), a repository of Skyline documents supporting published results. Panorama Public is built on Panorama, an open source data management system for mass spectrometry data processed with the Skyline targeted mass spectrometry environment. The Panorama web application facilitates viewing, sharing, and disseminating results contained in Skyline documents via a web-browser. Skyline users can easily upload their documents to a Panorama server and allow other researchers to explore uploaded results in the Panorama web-interface through a variety of familiar summary graphs as well as annotated views of the chromatographic peaks processed with Skyline. This makes Panorama ideal for sharing targeted, quantitative results contained in Skyline documents with collaborators, reviewers, and the larger proteomics community. The Panorama Public repository employs the full data visualization capabilities of Panorama which facilitates sharing results with reviewers during manuscript review.
为了满足对集中式、面向社区的已发布结果资源的需求，同时为评审人员和读者提供对已发表结论背后数据的直观访问，我们推出了 Panorama Public（https://panoramaweb.org/public.url），这是一个支持已发表结果的 Skyline 文档存储库。Panorama Public 建立在 Panorama 之上，Panorama 是一个用于处理 Skyline 靶向质谱环境的质谱数据的开源数据管理系统。Panorama 网络应用程序通过网络浏览器方便地查看、共享和传播 Skyline 文档中包含的结果。Skyline 用户可以轻松地将他们的文档上传到 Panorama 服务器，并允许其他研究人员通过各种熟悉的摘要图以及使用 Skyline 处理的色谱峰的注释视图在 Panorama 网络界面中探索上传的结果。这使得 Panorama 成为与合作者、评审人员和更广泛的蛋白质组学社区共享 Skyline 文档中包含的靶向、定量结果的理想选择。Panorama Public 存储库利用了 Panorama 的全部数据可视化功能，这有助于在稿件评审期间与评审人员共享结果。
