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运用综合生物信息学分析鉴定乳腺肿瘤微环境中CXC趋化因子的潜在治疗靶点

Identification of Potential Therapeutic Targets Among CXC Chemokines in Breast Tumor Microenvironment Using Integrative Bioinformatics Analysis.

作者信息

Chen Erbao, Qin Xuan, Peng Ke, Xu Xiaojing, Li Wei, Cheng Xi, Tang Cheng, Cui Yuehong, Wang Zhiming, Liu Tianshu

机构信息

Department of Medical Oncology, Zhongshan Hospital, Fudan University, Shanghai, China.

School of Chemical Biology and Biotechnology, Shenzhen Graduate School of Peking University, Shenzhen, China.

出版信息

Cell Physiol Biochem. 2018;45(5):1731-1746. doi: 10.1159/000487782. Epub 2018 Feb 23.

Abstract

BACKGROUND/AIMS: Breast cancer is a common cause of cancer mortality throughout the world. The cross-talk between cancer cells and interstitial cells exerts significant effects on neoplasia and tumor development and is modulated in part by chemokines. CXC is one of four chemokine families involved in mediating survival, angiogenesis, and immunosensitization by chemoattracting leukocytes, and it incentivizes tumor cell growth, invasion and metastasis in the tumor microenvironment. However, the differential expression profiles and prognostic values of these chemokines remains to be elucidated.

METHODS

In this study, we compared transcriptional CXC chemokines and survival data of patients with breast carcinoma (BC) using the ONCOMINE dataset, Kaplan-Meier Plotter, TCGA and cBioPortal.

RESULTS

We discovered increased mRNA levels for CXCL8/10/11/16/17, whereas mRNA expression of CXCL1/2/3/4/5/6/7/12/14 was lower in BC patients compared to non-tumor tissues. Kaplan-Meier plots revealed that high mRNA levels of CXCL1/2/3/4/5/6/7/12/14 correlate with relapse-free survival (RFS) in all types of BC patients. Conversely, high CXCL8/10/11 predicted worse RFS in BC patients. Significantly, high transcription levels of CXCL9/12/13/14 conferred an overall survival (OS) advantage in BC patients, while high levels of CXCL8 demonstrated shorter OS in all BC sufferers.

CONCLUSIONS

Integrative bioinformatics analysis suggests that CXCL8/12/14 are potential suitable targets for precision therapy in BC patients compared to other CXC chemokines.

摘要

背景/目的:乳腺癌是全球癌症死亡的常见原因。癌细胞与间质细胞之间的相互作用对肿瘤形成和肿瘤发展具有重要影响,且部分受趋化因子调节。CXC是参与通过趋化白细胞介导生存、血管生成和免疫致敏的四个趋化因子家族之一,它在肿瘤微环境中促进肿瘤细胞生长、侵袭和转移。然而,这些趋化因子的差异表达谱和预后价值仍有待阐明。

方法

在本研究中,我们使用ONCOMINE数据集、Kaplan-Meier Plotter、TCGA和cBioPortal比较了乳腺癌(BC)患者的转录CXC趋化因子和生存数据。

结果

我们发现CXCL8/10/11/16/17的mRNA水平升高,而与非肿瘤组织相比,BC患者中CXCL1/2/3/4/5/6/7/12/14的mRNA表达较低。Kaplan-Meier曲线显示,CXCL1/2/3/4/5/6/7/12/14的高mRNA水平与所有类型BC患者的无复发生存期(RFS)相关。相反,CXCL8/10/11水平高预示BC患者的RFS较差。值得注意的是,CXCL9/12/13/14的高转录水平赋予BC患者总生存期(OS)优势,而CXCL8水平高表明所有BC患者的OS较短。

结论

综合生物信息学分析表明,与其他CXC趋化因子相比,CXCL8/12/14是BC患者精准治疗的潜在合适靶点。

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