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通过重组酶聚合酶扩增快速灵敏检测水貂圆环病毒。

Rapid and sensitive detection of mink circovirus by recombinase polymerase amplification.

机构信息

College of Veterinary Medicine, Northeast Agricultural University, Harbin, 150030, China; Northeastern Science Inspection Station, China Ministry of Agriculture Key Laboratory of Animal Pathogen Biology, Harbin, 150030, China.

College of Veterinary Medicine, Northeast Agricultural University, Harbin, 150030, China.

出版信息

J Virol Methods. 2018 Jun;256:1-5. doi: 10.1016/j.jviromet.2018.02.022. Epub 2018 Mar 6.

Abstract

To date, the pathogenic role of mink circovirus (MiCV) remains unclear, and its prevalence and economic importance are unknown. Therefore, a rapid and sensitive molecular diagnosis is necessary for disease management and epidemiological surveillance. However, only PCR methods can identify MiCV infection at present. In this study, we developed a nested PCR and established a novel recombinase polymerase amplification (RPA) assay for MiCV detection. Sensitivity analysis showed that the detection limit of nested PCR and RPA assay was 10 copies/reaction, and these methods were more sensitive than conventional PCR, which has a detection limit of 10 copies/reaction. The RPA assay had no cross-reactivity with other related viral pathogens, and amplification was completed in less than 20 min with a simple device. Further assessment of clinical samples showed that the two assays were accurate in identifying positive and negative conventional PCR samples. The detection rate of MiCV by the RPA assay in clinical samples was 38.09%, which was 97% consistent with that by the nested PCR. The developed nested PCR is a highly sensitive tool for practical use, and the RPA assay is a simple, sensitive, and potential alternative method for rapid and accurate MiCV diagnosis.

摘要

迄今为止,水貂圆环病毒(MiCV)的致病作用尚不清楚,其流行情况和经济重要性也未知。因此,快速、敏感的分子诊断对于疾病管理和流行病学监测是必要的。然而,目前仅能通过 PCR 方法来识别 MiCV 感染。本研究中,我们开发了一种巢式 PCR,并建立了一种新型的重组酶聚合酶扩增(RPA)检测方法来检测 MiCV。敏感性分析表明,巢式 PCR 和 RPA 检测的检测限均为 10 拷贝/反应,比检测限为 10 拷贝/反应的常规 PCR 更灵敏。RPA 检测法与其他相关病毒病原体无交叉反应,并且使用简单的设备在不到 20 分钟内即可完成扩增。对临床样本的进一步评估表明,这两种检测方法均能准确识别常规 PCR 样本的阳性和阴性。RPA 检测法在临床样本中的 MiCV 检出率为 38.09%,与巢式 PCR 的检出率 97%一致。所开发的巢式 PCR 是一种高度敏感的实用工具,而 RPA 检测法是一种快速、准确的 MiCV 诊断的简单、敏感且有潜力的替代方法。

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