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两种鳞翅目昆虫(波纹夜蛾和星天牛)的线粒体基因组特征及其系统发育意义。

Mitochondrial genome characteristics of two Sphingidae insects (Psilogramma increta and Macroglossum stellatarum) and implications for their phylogeny.

机构信息

School of Life Sciences, Huaibei Normal University, Huaibei, Anhui, PR China.

School of Life Sciences, Huaibei Normal University, Huaibei, Anhui, PR China.

出版信息

Int J Biol Macromol. 2018 Jul 1;113:592-600. doi: 10.1016/j.ijbiomac.2018.02.159. Epub 2018 Mar 6.

Abstract

In this study, complete mitogenomes of P. increta and M. stellatarum (Lepidoptera: Sphingidae) were sequenced and compared with other Sphingidae species. The mitogenomes containing 37 genes and a AT rich region are circular molecules with 15,252 and 15,290 base pairs in length respectively. Except cox1 all 13 protein-coding genes (PCGs) are initiated by ATN codons. Most of PCGs terminate with TAA except nad5 and cox1 in P. increta and nad5 and cox2 in M. stellatarum. Ile and Leu2 are the most frequently used codon families in both species and codons CGC, CCG, TCG and ACG are absent in P. increta while in M. stellatarum CGC, CCG, CTG, AGG are absent. All the tRNA genes could be folded into the typical cloverleaf secondary structure except the trnS1 of P. increta which lost dihydrouridine (DHU) stem. The AT-rich region of both insects includes the motif ATAGA followed by a 18-19bp polyT stretch and 2-3 short tandem repeats (STRs) of TA, and a poly-A element. Phylogenetic analyses showed that the phylogenetic relationships are (((Sphinx morio+Manduca sexta)+(P. increta+Notonagemia analis scribae))+(Agrius convolvuli)+(M. stellatarum+(Ampelophaga rubiginosa+Daphnis nerii)).

摘要

在这项研究中,我们对 P. increta 和 M. stellatarum(鳞翅目:天蛾科)的完整线粒体基因组进行了测序,并与其他天蛾科物种进行了比较。这两个线粒体基因组都包含 37 个基因和一个富含 AT 的区域,是圆形分子,长度分别为 15,252 和 15,290 个碱基对。除了 cox1 之外,所有 13 个蛋白质编码基因(PCGs)都以 ATN 密码子起始。大多数 PCGs 以 TAA 终止,除了 P. increta 的 nad5 和 cox1 以及 M. stellatarum 的 nad5 和 cox2。Ile 和 Leu2 是这两个物种中最常用的密码子家族,而 P. increta 中没有 CGC、CCG、TCG 和 ACG 密码子,而 M. stellatarum 中没有 CGC、CCG、CTG、AGG 密码子。除了 P. increta 的 trnS1 丢失了二氢尿嘧啶(DHU)茎之外,所有的 tRNA 基因都可以折叠成典型的三叶草二级结构。这两种昆虫的富含 AT 的区域都包含了 ATAGA 基序,后面跟着一个 18-19bp 的多 T 延伸和 2-3 个短串联重复(STR)的 TA,以及一个多-A 元件。系统发育分析表明,系统发育关系为 (((Sphinx morio+Manduca sexta)+(P. increta+Notonagemia analis scribae))+(Agrius convolvuli)+(M. stellatarum+(Ampelophaga rubiginosa+Daphnis nerii)).

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