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代谢的高速示踪分析(HS-TrAM)。

High-Speed Tracer Analysis of Metabolism (HS-TrAM).

作者信息

Smith Thomas Brendan, Patel Kamlesh, Munford Haydn, Peet Andrew, Tennant Daniel A, Jeeves Mark, Ludwig Christian

机构信息

Institute of Metabolism and Systems Research, University of Birmingham, West Midlands, UK.

Institute of Cancer and Genomic Sciences, University of Birmingham, West Midlands, UK.

出版信息

Wellcome Open Res. 2018 Jan 12;3:5. doi: 10.12688/wellcomeopenres.13387.2. eCollection 2018.

Abstract

Tracing the fate of stable isotopically-enriched nutrients is a sophisticated method of describing and quantifying the activity of metabolic pathways. Nuclear Magnetic Resonance (NMR) offers high resolution data, yet is under-utilised due to length of time required to collect the data, quantification requiring multiple samples and complicated analysis. Here we present two techniques, quantitative spectral filters and enhancement of the splitting due to J-coupling in H, C-HSQC NMR spectra, which allow the rapid collection of NMR data in a quantitative manner on a single sample. The reduced duration of HSQC spectra data acquisition opens up the possibility of real-time tracing of metabolism including the study of metabolic pathways . We show how these novel techniques can be used to trace the fate of labelled nutrients in a whole organ model of kidney preservation prior to transplantation using a porcine kidney as a model organ, and also show how the use of multiple nutrients, differentially labelled with C and N, can be used to provide additional information with which to profile metabolic pathways.

摘要

追踪稳定同位素富集营养素的命运是一种描述和量化代谢途径活性的复杂方法。核磁共振(NMR)可提供高分辨率数据,但由于收集数据所需时间长、定量需要多个样本以及分析复杂,其应用未得到充分利用。在此,我们介绍两种技术,即定量光谱滤波器和增强H、C-HSQC NMR谱中J耦合引起的分裂,这两种技术可使我们以定量方式在单个样本上快速收集NMR数据。HSQC谱数据采集时间的缩短为实时追踪代谢(包括研究代谢途径)开辟了可能性。我们展示了如何使用这些新技术,以猪肾作为模型器官,在移植前的肾脏保存全器官模型中追踪标记营养素的命运,还展示了如何使用用碳和氮进行不同标记的多种营养素,来提供更多信息以描绘代谢途径。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0403/6107987/ad5bc27d385d/wellcomeopenres-3-16084-g0000.jpg

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