Fazeli Zeinab, Alebouyeh Masoud, Mansouri Vahid, Malekpour Habib
Gastroenterology and Liver Diseases Research Center, Research Institute for Gastroenterology and Liver Diseases, Shahid Beheshti University of Medical Sciences, Tehran, Iran.
Gastrointestinal and Liver Diseases Research Center, Iran University of Medical Sciences, Tehran, Iran.
Gastroenterol Hepatol Bed Bench. 2017 Winter;10(Suppl1):S139-S145.
The main objective of this study was to use high throughput approach to characterize the response of human gastric epithelial cells to () infection at protein level.
Alteration of host cell protein profiles occurs due to infection. This alteration seems to be strain specific. High throughput approaches, such as proteomics, can describe changes that occurs at the protein levelin the infected cells in response to infection. In accordance with this point of view, we used two dimensional electrophoresis (2-DE)/MS to determine changes in proteome profile of gastric epithelial cells infected with a clinical isolate of from an Iranian patient.
Human gastric epithelial cells (AGS) were infected by an Iranian isolate (complete PAI, , , , ). The altered protein patterns separated by 2-DE were identified by matrix-assisted laser desorption/ionization-time of flight mass spectrometry (MALDI-TOF MS) analysis.
The results showed 40 spots with significantly different intensities between the 2-DE gels. Protein SETSIP and Endoplasmic reticulum resident protein 29 were identified by MALD-TOF and Mascot search. Proteomic analysis for functional roles of these proteins showed that mechanisms to deal with stress conditions and transcriptional activator related to cell reprogramming are involved in . infection.
Using high throughput approaches, such as proteomics, we can provide further molecular details about interaction of strains with the infected cells at protein level.
本研究的主要目的是采用高通量方法在蛋白质水平上表征人胃上皮细胞对()感染的反应。
宿主细胞蛋白质谱的改变是由感染引起的。这种改变似乎具有菌株特异性。高通量方法,如蛋白质组学,可以描述受感染细胞在蛋白质水平上因感染而发生的变化。基于这一观点,我们使用二维电泳(2-DE)/质谱来确定感染来自一名伊朗患者的临床分离株的胃上皮细胞蛋白质组图谱的变化。
人胃上皮细胞(AGS)被一株伊朗分离株(完整的PAI,,,,)感染。通过基质辅助激光解吸/电离飞行时间质谱(MALDI-TOF MS)分析鉴定经2-DE分离的改变的蛋白质模式。
结果显示在2-DE凝胶之间有40个斑点的强度存在显著差异。通过MALD-TOF和Mascot搜索鉴定出蛋白质SETSIP和内质网驻留蛋白29。对这些蛋白质功能作用的蛋白质组学分析表明,应对应激条件的机制和与细胞重编程相关的转录激活因子参与了感染。
使用蛋白质组学等高通量方法,我们可以在蛋白质水平上提供关于菌株与受感染细胞相互作用的更多分子细节。