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从变异链球菌 ATCC 25175 中克隆、表达、鉴定并同源建模新型产水 NADH 氧化酶。

Cloning, expression, characterization and homology modeling of a novel water-forming NADH oxidase from Streptococcus mutans ATCC 25175.

机构信息

School of Pharmacy, United Pharmaceutical Institute of Jiangsu University and Shandong Tianzhilvye Biotechnology Co. Ltd., Jiangsu University, Zhenjiang 212013, People's Republic of China.

College of Petroleum and Chemical Engineering, Qinzhou University, Qinzhou 535011, People's Republic of China.

出版信息

Int J Biol Macromol. 2018 Jul 1;113:1073-1079. doi: 10.1016/j.ijbiomac.2018.03.016. Epub 2018 Mar 4.

Abstract

A novel nicotinamide adenine dinucleotide (NADH) oxidase from Streptococcus mutans ATCC 25175 (SmNox) was cloned and overexpressed in Escherichia coli BL21 (DE3). Sequence analysis revealed an open reading frame of 1374bp, capable of encoding a polypeptide of 457 amino acid residues. The molecular mass of the purified SmNox was estimated to be ∼49.9kDa by sodium dodecyl sulfate-polyacrylamide gel electrophoresis. The purified SmNox had the highest specific activity of 281.2U·mg at optimal pH and temperature of 7.0 and 35°C, with a K of 57.7μM and a V of 154.3U·mg. The good stability at room temperature was observed. Homology modeling and substrate docking were performed to evaluate the catalytic characteristics. The results indicated that Nicotinamide ring of NADH extends vertically toward to re-face of coenzyme (FAD), and the specific conformation of NADH suggested that the charges transfer in SmNox complex could be easier than in its homologous enzyme (LbNox) under alkaline environment. The characterization of the SmNox indicated it has potential in industrial regeneration of coenzyme NAD for coupling with dehydrogenases.

摘要

从变异链球菌 ATCC 25175(SmNox)中克隆并在大肠杆菌 BL21(DE3)中过表达了一种新型烟酰胺腺嘌呤二核苷酸(NADH)氧化酶。序列分析显示,开放阅读框为 1374bp,能够编码 457 个氨基酸残基的多肽。通过十二烷基硫酸钠-聚丙烯酰胺凝胶电泳估算,纯化的 SmNox 的分子质量约为 49.9kDa。在最佳 pH 值和温度 7.0 和 35°C 下,纯化的 SmNox 的比活力最高为 281.2U·mg,K 值为 57.7μM,V 值为 154.3U·mg。在室温下观察到良好的稳定性。进行了同源建模和底物对接以评估催化特性。结果表明,NADH 的烟酰胺环垂直延伸到辅酶(FAD)的反面,NADH 的特殊构象表明,在碱性环境下,SmNox 复合物中的电荷转移可能比其同源酶(LbNox)更容易。SmNox 的特性表明它在与脱氢酶偶联的辅酶 NAD 工业再生中具有潜力。

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