Department of Biotechnology, Faculty of Agriculture, Tarbiat Modares University, Tehran, Iran.
Department of Agronomy and Plant Breeding, University of Tehran, Karaj, Iran.
Sci Rep. 2018 Mar 21;8(1):4973. doi: 10.1038/s41598-018-23351-0.
Noscapine is an antitumor alkaloid produced in opium poppy (Papaver somniferum) and some members of the Papaveraceae family. It has been primarily used for its antitussive effects; more recently, its anticancer properties were shown. Herein, we detected an SSR embedded in the promoter region of the CYP82Y1 gene, which was found to be the first committed-step enzyme in the noscapine biosynthesis pathway, using the MISA program. Some collected ecotypes of P. somniferum were investigated for understanding of SSRs role in the regulation of gene expression and metabolite content. Quantitative PCR showed that a variation in the motif repeat number (either a decrease or increase) down-regulated the expression of the CYP82Y1 gene. Furthermore, the analysis of noscapine content suggested that a variation in the promoter region influence noscapine amount. Moreover, P. bracteatum was analyzed in both transcript and metabolite levels, and illustrated much less expression and metabolite level in comparison to P. somniferum. By exploiting the transcriptome data from the eight genera of the Papaveraceae family, we found that noscapine biosynthesis genes are present in P. bracteatum and are not shared in other genera of the Papaveraceae family. This results may explain production of a confined metabolite within a genus.
那可丁是一种在罂粟(Papaver somniferum)和罂粟科某些成员中产生的抗肿瘤生物碱。它主要用于镇咳作用;最近,它的抗癌特性也被发现。在这里,我们使用 MISA 程序检测到 CYP82Y1 基因启动子区域内嵌入的 SSR,该基因被发现是那可丁生物合成途径中的第一个关键酶。为了了解 SSR 在基因表达和代谢物含量调节中的作用,对一些收集的罂粟生态型进行了研究。定量 PCR 显示,基序重复数的变化(减少或增加)下调了 CYP82Y1 基因的表达。此外,对那可丁含量的分析表明,启动子区域的变异会影响那可丁的含量。此外,还对 P. bracteatum 进行了转录和代谢物水平的分析,与 P. somniferum 相比,其表达和代谢物水平要低得多。通过利用罂粟科 8 个属的转录组数据,我们发现那可丁生物合成基因存在于 P. bracteatum 中,而不在罂粟科的其他属中共享。这一结果可能解释了一个属内有限的代谢物的产生。