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Molecular simulation of pH-dependent diffusion, loading, and release of doxorubicin in graphene and graphene oxide drug delivery systems.石墨烯及氧化石墨烯药物递送系统中阿霉素pH依赖性扩散、负载与释放的分子模拟
J Mater Chem B. 2016 Dec 14;4(46):7441-7451. doi: 10.1039/c6tb00746e. Epub 2016 Nov 10.
2
Increased dispersion and solubility of carbon nanotubes noncovalently modified by the polysaccharide biopolymer, chitosan: MD simulations.多糖生物聚合物壳聚糖非共价修饰的碳纳米管的分散性和溶解性增强:分子动力学模拟
Chem Phys Lett. 2011 Apr 29;507(1):134-137. doi: 10.1016/j.cplett.2011.03.066. Epub 2011 Mar 24.
3
Pegylated and folic acid functionalized carbon nanotubes as pH controlled carriers of doxorubicin. Molecular dynamics analysis of the stability and drug release mechanism.聚乙二醇化和叶酸功能化的碳纳米管作为阿霉素的pH值控制载体。稳定性和药物释放机制的分子动力学分析。
Phys Chem Chem Phys. 2017 Mar 29;19(13):9300-9312. doi: 10.1039/c7cp00702g.
4
Targeted Biomimetic Nanoparticles for Synergistic Combination Chemotherapy of Paclitaxel and Doxorubicin.用于紫杉醇和阿霉素协同联合化疗的靶向仿生纳米颗粒
Mol Pharm. 2017 Jan 3;14(1):107-123. doi: 10.1021/acs.molpharmaceut.6b00732. Epub 2016 Dec 16.
5
Carbon nanotubes as cancer therapeutic carriers and mediators.碳纳米管作为癌症治疗载体和介质。
Int J Nanomedicine. 2016 Oct 7;11:5163-5185. doi: 10.2147/IJN.S112660. eCollection 2016.
6
pH-controlled doxorubicin anticancer loading and release from carbon nanotube noncovalently modified by chitosan: MD simulations.pH调控的阿霉素从壳聚糖非共价修饰的碳纳米管中的抗癌负载与释放:分子动力学模拟
J Mol Graph Model. 2016 Nov;70:70-76. doi: 10.1016/j.jmgm.2016.09.011. Epub 2016 Sep 21.
7
Exceedingly Higher co-loading of Curcumin and Paclitaxel onto Polymer-functionalized Reduced Graphene Oxide for Highly Potent Synergistic Anticancer Treatment.聚合物功能化还原氧化石墨烯上超高共载姜黄素和紫杉醇用于高效协同抗癌治疗。
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8
Coadsorption of Doxorubicin and Selected Dyes on Carbon Nanotubes. Theoretical Investigation of Potential Application as a pH-Controlled Drug Delivery System.多柔比星和选定染料在碳纳米管上的共吸附。作为 pH 控制药物传递系统的潜在应用的理论研究。
Langmuir. 2016 May 17;32(19):4719-28. doi: 10.1021/acs.langmuir.6b00296. Epub 2016 May 9.
9
Interaction Mechanism of Doxorubicin and SWCNT: Protonation and Diameter Effects on the Drug Loading and Releasing.阿霉素与单壁碳纳米管的相互作用机制:质子化和直径对药物负载与释放的影响
RSC Adv. 2016;6(1):314-322. doi: 10.1039/C5RA20866A. Epub 2015 Dec 3.
10
Co-delivery of doxorubicin and curcumin by pH-sensitive prodrug nanoparticle for combination therapy of cancer.通过pH敏感前药纳米颗粒共递送阿霉素和姜黄素用于癌症联合治疗
Sci Rep. 2016 Feb 15;6:21225. doi: 10.1038/srep21225.

通过分子动力学模拟理解壳聚糖功能化单壁碳纳米管对阿霉素和紫杉醇的共载与释放。

Understanding the co-loading and releasing of doxorubicin and paclitaxel using chitosan functionalized single-walled carbon nanotubes by molecular dynamics simulations.

机构信息

Department of Chemistry and Forensic Science, Albany State University, Albany, GA 31705, USA.

出版信息

Phys Chem Chem Phys. 2018 Apr 4;20(14):9389-9400. doi: 10.1039/C8CP00124C.

DOI:10.1039/C8CP00124C
PMID:29565091
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC5898243/
Abstract

Two widely used anticancer drugs, doxorubicin (DOX) and paclitaxel (PTX), possess distinct physical properties and chemotherapy specificity. In order to investigate their interaction mechanism with single-walled carbon nanotubes (SWCNTs), co-loading and releasing from the SWCNTs, all-atom molecular dynamics (MD) simulations were firstly carried out for different SWCNT systems, followed by binding free energy calculation with MM-PBSA. The results indicate that the co-loading of DOX and PTX onto the pristine SWCNT is exothermic and spontaneous. The DOX molecules predominantly interact with the SWCNT via π-π stacking through the conjugated aromatic rings, while the separated aromatic rings of PTX also primarily interact with the SWCNT through π-π stacking yet supplemented by an X-π (X = C-H, N-H and C[double bond, length as m-dash]O) interaction. Moreover, the strongest binding of DOX and PTX with the pristine SWCNT shows similar strength (ΔG: -32.0 vs. -33.8 kcal mol-1). For the chitosan functionalized SWCNT (f-SWCNT), the DOX and PTX molecules still prefer binding to the sidewall of the CNT rather than binding with the polymer, and the non-covalent functionalization of the SWCNT with chitosan decreases the binding of DOX and PTX with the sidewall of the f-SWCNT as compared with the DOX/PTX-SWCNT system (ΔG: -24.0 and -21.9 kcal mol-1). The protonation of chitosan and drug molecules further weakens the interaction between DOX/PTX and the f-SWCNT, and shows a consequent displacement of the drug molecules, triggering the release of the drugs. The variation of binding strength of the three systems (DOX/PTX-SWCNT, DOX/PTX-f-SWCNT, and DOXH+/PTXH+-f-SWCNT) was also discussed in terms of the histogram or frequency of the distance from the drugs to the SWCNT. In addition, the encapsulation of two DOX molecules by the f-SWCNT is considerably stronger than the binding of the other six drug molecules to the sidewall, indicating that the encapsulation of anticancer drugs may also play a very important role and should be considered in the drug delivery.

摘要

两种广泛使用的抗癌药物,阿霉素(DOX)和紫杉醇(PTX),具有不同的物理性质和化疗特异性。为了研究它们与单壁碳纳米管(SWCNT)的相互作用机制,包括从 SWCNT 上的共加载和释放,首先对不同的 SWCNT 系统进行了全原子分子动力学(MD)模拟,然后通过 MM-PBSA 计算结合自由能。结果表明,DOX 和 PTX 共加载到原始 SWCNT 上是放热和自发的。DOX 分子主要通过共轭芳环的π-π堆积与 SWCNT 相互作用,而 PTX 的分离芳环也主要通过π-π堆积与 SWCNT 相互作用,但辅以 X-π(X = C-H、N-H 和 C[双键,长度为 m-dash]O)相互作用。此外,DOX 和 PTX 与原始 SWCNT 的最强结合表现出相似的强度(ΔG:-32.0 与-33.8 kcal mol-1)。对于壳聚糖功能化的 SWCNT(f-SWCNT),DOX 和 PTX 分子仍然更喜欢与 CNT 的侧壁结合,而不是与聚合物结合,并且 SWCNT 与壳聚糖的非共价功能化与 DOX/PTX-SWCNT 系统相比降低了 DOX 和 PTX 与 f-SWCNT 侧壁的结合(ΔG:-24.0 和-21.9 kcal mol-1)。壳聚糖和药物分子的质子化进一步削弱了 DOX/PTX 与 f-SWCNT 的相互作用,并导致药物分子的位移,触发药物的释放。还讨论了三个系统(DOX/PTX-SWCNT、DOX/PTX-f-SWCNT 和 DOXH+/PTXH+-f-SWCNT)的结合强度变化,包括药物与 SWCNT 的距离直方图或频率。此外,f-SWCNT 中两个 DOX 分子的封装强度明显强于其他六个药物分子与侧壁的结合,表明抗癌药物的封装也可能发挥非常重要的作用,在药物输送中应予以考虑。