肠炎沙门氏菌肠炎亚种斯坦弗伯格N17-509株（一株缺乏沙门氏菌致病岛1的菌株）的完整组装基因组序列
Complete and Assembled Genome Sequence of Salmonella enterica subsp. enterica Serotype Senftenberg N17-509, a Strain Lacking Salmonella Pathogen Island 1.
作者信息
Stevens Marc J A, Zurfluh Katrin, Althaus Denise, Corti Sabrina, Lehner Angelika, Stephan Roger
机构信息
Institute for Food Safety and Hygiene, Vetsuisse Faculty, University of Zurich, Zurich, Switzerland.
Institute for Food Safety and Hygiene, Vetsuisse Faculty, University of Zurich, Zurich, Switzerland
出版信息
Genome Announc. 2018 Mar 22;6(12):e00156-18. doi: 10.1128/genomeA.00156-18.
Abstract
The genome of subsp. serotype Senftenberg N17-509, a strain isolated from desiccated coconut, was sequenced using single-molecule real-time sequencing. It consists of a 5.1-Mbp chromosome and a 29-kb linear plasmid.
摘要
从干椰子中分离出的森夫滕贝格亚种血清型N17-509菌株的基因组，采用单分子实时测序技术进行了测序。它由一条5.1兆碱基对的染色体和一个29千碱基的线性质粒组成。
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2
Ori-Finder: a web-based system for finding oriCs in unannotated bacterial genomes.Ori-Finder：一种用于在未注释细菌基因组中查找oriC的基于网络的系统。
BMC Bioinformatics. 2008 Feb 1;9:79. doi: 10.1186/1471-2105-9-79.
3
A novel linear plasmid mediates flagellar variation in Salmonella Typhi.一种新型线性质粒介导伤寒沙门氏菌的鞭毛变异。
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