Research Centre for Radwaste Disposal and Williamson Research Centre for Molecular Environmental Science, School of Earth and Environmental Sciences, The University of Manchester, Oxford Road, Manchester M13 9PL, UK.
Int J Syst Evol Microbiol. 2019 Dec;69(12):3666-3671. doi: 10.1099/ijsem.0.002721.
Strain NB2006 was isolated from an isosaccharinate-degrading, nitrate-reducing enrichment culture in minimal freshwater medium at pH 10. Analysis of the 16S rRNA gene sequence indicated that this strain was most closely related to species of the newly established genus . This was supported by phenotypic and metabolic characterisation that showed that NB2006 was rod-shaped, Gram-stain-positive, motile and formed endospores. It was an aerotolerant anaerobe and an obligate alkaliphile that grew at pH 8.5-11, could tolerate up to 6 % (w/v) NaCl, and grew at a temperature between 10 and 40 °C. In addition, it could utilise a number of organic substrates, and was able to reduce nitrate and arsenate. The predominant cellular fatty acids were C, Cω11, anteiso-C, iso-C, Cω7/iso-C 2-OH and C. The cell wall peptidoglycan contained -diaminopimelic acid and the DNA G+C content was 37.7 mol%. DNA-DNA hybridization with the four known species of the genus showed 21.8, 21.9, 22.4, and 21.5 % relatedness to DSM 15340, DSM 22531, DSM 18345, and DSM 16346, respectively. NB2006 differed from strains of other species of the genus in its ability to metabolise isosaccharinate, an alkaline hydrolysis product of cellulose. On the basis of the consensus of phylogenetic and phenotypic analyses, this strain represents a novel species of the genus , for which the name sp. nov. is proposed. The type strain is NB2006 (=DSM 100644=LMG 30032).
NB2006 菌株从一个在 pH 值为 10 的最小淡水培养基中,以异蔗糖酸盐降解和硝酸盐还原为优势的富集培养物中分离得到。16S rRNA 基因序列分析表明,该菌株与新建立的属的种最为密切相关。这一结果得到了表型和代谢特征的支持,表明 NB2006 是杆状、革兰氏阳性、能动和形成芽孢的。它是一种兼性厌氧菌和专性嗜碱菌,可在 pH 值为 8.5-11 的条件下生长,能耐受高达 6%(w/v)的 NaCl,并且能在 10-40°C 的温度范围内生长。此外,它可以利用多种有机底物,并能还原硝酸盐和砷酸盐。主要的细胞脂肪酸为 C、Cω11、anteiso-C、iso-C、Cω7/iso-C 2-OH 和 C。细胞壁肽聚糖含有 -二氨基庚二酸,DNA G+C 含量为 37.7 mol%。与属内的四个已知种的 DNA-DNA 杂交显示,与 DSM 15340、DSM 22531、DSM 18345 和 DSM 16346 的相关性分别为 21.8%、21.9%、22.4%和 21.5%。NB2006 与属内其他种的菌株在代谢异蔗糖酸盐的能力上有所不同,异蔗糖酸盐是纤维素的碱性水解产物。基于系统发育和表型分析的共识,该菌株代表了一个新的种,建议将其命名为 。模式菌株为 NB2006(=DSM 100644=LMG 30032)。