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NS 型配体的 Co(III) 配合物作为腈水合酶催化异氰化物水解反应的结构/功能模型。

Co(III) Complexes with NS-Type Ligands as Structural/Functional Models for the Isocyanide Hydrolysis Reaction Catalyzed by Nitrile Hydratase.

机构信息

Department of Frontier Materials, Graduate School of Engineering , Nagoya Institute of Technology , Gokiso-cho, Showa-ku, Nagoya 466-8555 , Japan.

Department of Applied Chemistry, Graduate School of Engineering , Aichi Institute of Technology , Yakusa, Toyota 470-0392 , Japan.

出版信息

Inorg Chem. 2018 Apr 16;57(8):4277-4290. doi: 10.1021/acs.inorgchem.6b02324. Epub 2018 Mar 27.

DOI:10.1021/acs.inorgchem.6b02324
PMID:29582997
Abstract

It has been before reported that, in addition to hydration of nitriles, the Fe-type nitrile hydratase (NHase) also catalyzes the hydrolysis of tert-butylisocyanide ( tBuNC). In order to investigate the unique isocyanide hydrolysis by NHase, we prepared three related Co(III) model complexes, PPh[Co(L)] (1), PPh[Co(L-O)] (2), and PPh[Co(L-O)] (3), where L is bis( N-(2-mercapto-2-methylpropionyl)aminopropyl)sulfide. The suffixes L-O and L-O indicate ligands with a sulfenate and a sulfinate and with two sulfinates, respectively, instead of the two thiolates of L. The X-ray analyses of 1 and 3 reveal trigonal bipyramidal and square pyramidal structures, respectively. Complex 2, however, has five-coordinate trigonal-bipyramidal geometry with η-type S-O coordination by a sulfenyl group. Addition of tBuNC to 1, 2, and 3 induces an absorption spectral change as a result of formation of an octahedral Co(III) complex. This interpretation is also supported by the crystal structures of PPh[Co(L-O)( tBuNC)] (4) and (PPh)[Co(L-O)(CN)] (5). A water molecule interacts with 3 but cannot be activated as reported previously, as demonstrated by the lack of absorption spectral change in the pH range of 5.5-10.2. Interestingly, the coordinated tBuNC is hydrolyzed by 2 and 3 at pH 10.2 to produce tBuNH and CO molecule, but 1 does not react. These findings provide strong evidence that hydrolysis of tBuNC by NHase proceeds not by activation of the coordinated water molecule but by coordination of the substrate. The mechanism of the hydrolysis reaction of tBuNC is explained with support provided by DFT calculations; a positively polarized C atom of tBuNC on the Co(III) center is nucleophilically attacked by a hydroxide anion activated through an interaction of the sulfenyl/sulfinyl oxygen with the nucleophile.

摘要

先前已有报道称,除腈水合作用外,Fe 型腈水合酶(NHase)还可催化叔丁基异氰酸酯(tBuNC)的水解。为了研究 NHase 对异氰化物的独特水解作用,我们制备了三个相关的 Co(III)模型配合物,PPh[Co(L)](1)、PPh[Co(L-O)](2)和 PPh[Co(L-O)](3),其中 L 为双(N-(2-巯基-2-甲基丙酰基)氨丙基)硫化物。后缀 L-O 和 L-O 分别表示配体带有一个亚磺酸盐和一个亚磺酸盐以及两个亚磺酸盐,而不是 L 的两个硫醇盐。1 和 3 的 X 射线分析分别揭示了三角双锥和四方锥结构。然而,2 具有五配位三角双锥几何形状,其中一个亚磺酰基通过 η 型 S-O 配位。向 1、2 和 3 添加 tBuNC 会导致形成八面体 Co(III)配合物,从而引起吸收光谱变化。这一解释也得到了 PPh[Co(L-O)(tBuNC)](4)和(PPh)[Co(L-O)(CN)](5)的晶体结构的支持。一个水分子与 3 相互作用,但不能像之前报道的那样被激活,这一点可以从在 pH 值为 5.5-10.2 的范围内没有吸收光谱变化中得到证明。有趣的是,配合物 2 和 3 在 pH 值为 10.2 时可将配位的 tBuNC 水解为 tBuNH 和 CO 分子,但 1 不反应。这些发现为 NHase 催化 tBuNC 水解不是通过激活配位水分子,而是通过底物的配位来进行提供了有力的证据。水解反应的机制通过 DFT 计算得到了解释;tBuNC 上带正电荷的 C 原子在被羟基阴离子亲核进攻,羟基阴离子通过与亲核试剂的亚磺酰基/亚磺酸盐氧相互作用而被激活。

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