Division of Gastroenterology, Tohoku University Graduate School of Medicine, Sendai, Japan.
Department of Integrative Genomics, Tohoku Medical Megabank Organization, Tohoku University, Sendai, Japan.
J Gastroenterol Hepatol. 2018 Nov;33(11):1873-1881. doi: 10.1111/jgh.14149. Epub 2018 May 8.
Patients with inflammatory bowel disease (IBD) are at a high risk of low bone mineral density (BMD). Reportedly, clinical and genetic factors cause low BMD in Caucasians; however, studies in non-Caucasian populations remain scarce.
Clinical risk factors for low BMD were investigated in 266 Japanese patients with IBD, and a genome-wide association analysis (GWAS) was performed using linear regression with associated clinical factors as covariates. Genotyping was performed using a population-optimized genotyping array (Japonica array ). After quality control, the genotype data of 4 384 682 single-nucleotide polymorphisms (SNPs) from 254 patients with IBD were used for GWAS.
Body mass index, age, and disease duration were independently associated with the BMD of the femoral neck (P = 1.41E - 13, 1.04E - 5, and 1.58E - 3, respectively), and body mass index and sex were associated with the BMD of the lumbar spine (P = 6.90E - 10 and 6.84E - 3, respectively). In GWAS, 118 and 42 candidate SNPs of the femoral neck and lumbar spine, respectively, were identified. Among 118, 111 candidate SNPs of the femoral neck were located within the SLC22A23 gene, which is a known IBD susceptibility gene (minimum P = 1.42E - 07). Among 42, 18 candidate SNPs of the lumbar spine were located within the MECOM gene, which is associated with osteopenia (minimum P = 5.86E - 07). Interestingly, none of the known loci showed a significant association with BMD.
Although clinical risk factors for low BMD in IBD were similar to those in the general population, genetic risk factors were rather different.
炎症性肠病(IBD)患者存在低骨密度(BMD)的高风险。据报道,临床和遗传因素导致白种人 BMD 降低;然而,非白种人群的研究仍然很少。
对 266 例日本 IBD 患者的低 BMD 临床危险因素进行了调查,并使用线性回归进行了全基因组关联分析(GWAS),将相关临床因素作为协变量。采用人群优化的基因分型阵列(Japonica 阵列)进行基因分型。质量控制后,对 254 例 IBD 患者的 4,384,682 个单核苷酸多态性(SNP)的基因型数据进行了 GWAS。
体重指数、年龄和疾病持续时间与股骨颈 BMD 独立相关(P=1.41E-13、1.04E-5 和 1.58E-3),体重指数和性别与腰椎 BMD 相关(P=6.90E-10 和 6.84E-3)。在 GWAS 中,分别鉴定出股骨颈和腰椎的 118 和 42 个候选 SNP。在 118 个候选 SNP 中,股骨颈的 111 个候选 SNP 位于 SLC22A23 基因内,该基因是已知的 IBD 易感基因(最小 P=1.42E-07)。在 42 个候选 SNP 中,腰椎的 18 个候选 SNP 位于 MECOM 基因内,该基因与骨质疏松症相关(最小 P=5.86E-07)。有趣的是,没有一个已知的基因座与 BMD 显著相关。
尽管 IBD 患者低 BMD 的临床危险因素与一般人群相似,但遗传危险因素却大不相同。