Canive Maria, Badia-Bringué Gerard, Alonso-Hearn Marta
NEIKER-Basque Research and Technology Alliance (BRTA), 20850 Derio, Spain.
Doctoral Program in Molecular Biology and Biomedicine, Universidad del País Vasco/Euskal Herriko Unibertsitatea (UPV/EHU), 48940 Leioa, Spain.
Animals (Basel). 2022 Nov 4;12(21):3038. doi: 10.3390/ani12213038.
An in silico genomic-transcriptomic combined approach allowed the identification of a polymorphism (cis-eQTL-rs41976219) in the genome associated with the CTSG mRNA expression in bovine blood samples, which suggests that individual genetic variation might modulate the transcriptional response. In the current study, a sandwich ELISA is used to measure the CTSG protein levels in supernatants of monocyte-derived macrophages (MDMs) isolated from cows with the AA ( = 5) and AC ( = 11) genotypes for the rs41976219 and infected ex vivo with MAP. Cows with the AC genotype have significantly higher CTSG protein levels (1.85 ng/mL) in the supernatants of enriched CD14+-MDMs after 2 h of infection when compared with infected CD14+-MDMs from cows with the AA genotype (1.68 ng/mL). Statistically significant differences in the intracellular MAP load at 7 d p.i. are observed between animals with the AA (2.16 log CFUs) and AC (1.44 log CFUs) genotypes. Finally, the association between the rs41976219 allelic variants and resistance to PTB is tested in a larger cattle population ( = 943) classified according to the presence ( = 442) or absence ( = 501) of PTB-associated lesions. The presence of the two minor alleles in the rs41976219 (CC) is more frequent among healthy cows than in cows with PTB-associated lesions in gut tissues (2.2% vs. 1.4%, OR = 0.61). In agreement with this, the CTSG levels in plasma samples of cows without lesions in gut tissues and with the CC ( = 8) genotype are significantly higher than in the plasmas of cows with the AA + AC ( = 36) genotypes.
一种计算机模拟的基因组-转录组联合方法能够识别出牛血液样本基因组中与CTSG mRNA表达相关的一种多态性(顺式eQTL-rs41976219),这表明个体遗传变异可能会调节转录反应。在本研究中,采用夹心ELISA法测定从具有rs41976219的AA(n = 5)和AC(n = 11)基因型的奶牛中分离出的单核细胞衍生巨噬细胞(MDM)上清液中的CTSG蛋白水平,并在体外感染副结核分枝杆菌(MAP)。与具有AA基因型的奶牛感染后的CD14 + -MDM(1.68 ng/mL)相比,具有AC基因型的奶牛在感染2小时后,富集的CD14 + -MDM上清液中的CTSG蛋白水平显著更高(1.85 ng/mL)。在感染后7天,观察到AA(2.16 log CFUs)和AC(1.44 log CFUs)基因型动物之间细胞内MAP载量存在统计学上的显著差异。最后,在一个根据是否存在与PTB相关病变分类的更大牛群(n = 943)中测试rs41976219等位基因变体与PTB抗性之间的关联。rs41976219(CC)中两个次要等位基因的存在在健康奶牛中比在肠道组织中有PTB相关病变的奶牛中更常见(2.2%对1.4%,OR = 0.61)。与此一致的是,肠道组织无病变且具有CC(n = 8)基因型的奶牛血浆样本中的CTSG水平显著高于具有AA + AC(n = 36)基因型的奶牛血浆中的CTSG水平。