• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

翱翔于RNA之巢:果蝇揭示早期发育转录组动态的新见解

Flying the RNA Nest: Drosophila Reveals Novel Insights into the Transcriptome Dynamics of Early Development.

作者信息

Lefebvre Fabio Alexis, Lécuyer Éric

机构信息

Institut de Recherches Cliniques de Montréal (IRCM), Montréal, QC H2W 1R7, Canada.

Département de Biochimie, Université de Montréal, Montréal, QC H3T 1J4, Canada.

出版信息

J Dev Biol. 2018 Mar 7;6(1):5. doi: 10.3390/jdb6010005.

DOI:10.3390/jdb6010005
PMID:29615554
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC5875563/
Abstract

Early development is punctuated by a series of pervasive and fast paced transitions. These events reshape a differentiated oocyte into a totipotent embryo and allow it to gradually mount a genetic program of its own, thereby framing a new organism. Specifically, developmental transitions that ensure the maternal to embryonic control of developmental events entail a deep remodeling of transcriptional and transcriptomic landscapes. provides an elegant and genetically tractable system to investigate these conserved changes at a dazzling developmental pace. Here, we review recent studies applying emerging technologies such as ribosome profiling, in situ Hi-C chromatin probing and live embryo RNA imaging to investigate the transcriptional dynamics at play during embryogenesis. In light of this new literature, we revisit the main models of zygotic genome activation (ZGA). We also review the contributions played by zygotic transcription in shaping embryogenesis and explore emerging concepts of processes such as transcriptional bursting and transcriptional memory.

摘要

早期发育以一系列普遍且快速的转变为特征。这些事件将一个已分化的卵母细胞重塑为一个全能胚胎,并使其能够逐渐启动自身的遗传程序,从而构建一个新的生物体。具体而言,确保发育事件从母体控制向胚胎控制转变的发育转变需要对转录和转录组景观进行深度重塑。 提供了一个优雅且遗传上易于处理的系统,以惊人的发育速度研究这些保守变化。在这里,我们回顾了最近的研究,这些研究应用了诸如核糖体谱分析、原位Hi-C染色质探测和活胚胎RNA成像等新兴技术,以研究胚胎发生过程中发挥作用的转录动态。鉴于这些新文献,我们重新审视了合子基因组激活(ZGA)的主要模型。我们还回顾了合子转录在塑造胚胎发生过程中的作用,并探讨了诸如转录爆发和转录记忆等过程的新兴概念。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c236/5875563/8a830b929a56/jdb-06-00005-g007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c236/5875563/277108edbded/jdb-06-00005-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c236/5875563/cd17b93c0232/jdb-06-00005-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c236/5875563/66bb4eea686d/jdb-06-00005-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c236/5875563/ad0ccb28830e/jdb-06-00005-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c236/5875563/41e91ee6a154/jdb-06-00005-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c236/5875563/b92cd78dcea7/jdb-06-00005-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c236/5875563/8a830b929a56/jdb-06-00005-g007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c236/5875563/277108edbded/jdb-06-00005-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c236/5875563/cd17b93c0232/jdb-06-00005-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c236/5875563/66bb4eea686d/jdb-06-00005-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c236/5875563/ad0ccb28830e/jdb-06-00005-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c236/5875563/41e91ee6a154/jdb-06-00005-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c236/5875563/b92cd78dcea7/jdb-06-00005-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c236/5875563/8a830b929a56/jdb-06-00005-g007.jpg

相似文献

1
Flying the RNA Nest: Drosophila Reveals Novel Insights into the Transcriptome Dynamics of Early Development.翱翔于RNA之巢:果蝇揭示早期发育转录组动态的新见解
J Dev Biol. 2018 Mar 7;6(1):5. doi: 10.3390/jdb6010005.
2
Transcriptional Regulation During Zygotic Genome Activation in Zebrafish and Other Anamniote Embryos.斑马鱼和其他无羊膜动物胚胎合子基因组激活过程中的转录调控
Adv Genet. 2016;95:161-94. doi: 10.1016/bs.adgen.2016.05.001. Epub 2016 Jul 4.
3
Comparative transcriptome analysis explores maternal to zygotic transition during Eriocheir sinensis early embryogenesis.比较转录组分析探讨了中华绒螯蟹早期胚胎发生过程中从母体到合子的转变。
Gene. 2019 Feb 15;685:12-20. doi: 10.1016/j.gene.2018.10.036. Epub 2018 Oct 12.
4
Biochemical Fractionation of Time-Resolved Drosophila Embryos Reveals Similar Transcriptomic Alterations in Replication Checkpoint and Histone mRNA Processing Mutants.时间分辨的果蝇胚胎的生化分离显示,在复制检查点和组蛋白 mRNA 加工突变体中存在相似的转录组改变。
J Mol Biol. 2017 Oct 27;429(21):3264-3279. doi: 10.1016/j.jmb.2017.01.022. Epub 2017 Feb 3.
5
Transcriptional and translational dynamics during maternal-to-zygotic transition in early chicken development.在鸡早期胚胎发育的母源到合子过渡过程中转录和翻译的动力学。
FASEB J. 2018 Apr;32(4):2004-2011. doi: 10.1096/fj.201700955R. Epub 2018 Jan 5.
6
The zinc-finger protein Zelda is a key activator of the early zygotic genome in Drosophila.锌指蛋白泽尔达是果蝇早期合子基因组的关键激活因子。
Nature. 2008 Nov 20;456(7220):400-3. doi: 10.1038/nature07388. Epub 2008 Oct 19.
7
Regulation and Function of Maternal Gene Products During the Maternal-to-Zygotic Transition in Drosophila.果蝇母源向合子转变过程中母源基因产物的调控与功能
Curr Top Dev Biol. 2015;113:43-84. doi: 10.1016/bs.ctdb.2015.06.007. Epub 2015 Aug 14.
8
The Zygotic Transition Is Initiated in Unicellular Plant Zygotes with Asymmetric Activation of Parental Genomes.合子有丝分裂启动于具有双亲基因组不对称激活的单细胞植物合子。
Dev Cell. 2017 Nov 6;43(3):349-358.e4. doi: 10.1016/j.devcel.2017.10.005.
9
Transcriptional and post-transcriptional regulation of maternal and zygotic cytoskeletal tropomyosin mRNA during Drosophila development correlates with specific morphogenic events.在果蝇发育过程中,母体和合子细胞骨架原肌球蛋白mRNA的转录和转录后调控与特定的形态发生事件相关。
Dev Biol. 1994 Oct;165(2):639-53. doi: 10.1006/dbio.1994.1282.
10
Unveiling Gene Expression Dynamics during Early Embryogenesis in : A Transcriptomic Perspective.从转录组学角度揭示早期胚胎发育过程中的基因表达动态。
Life (Basel). 2024 Apr 15;14(4):505. doi: 10.3390/life14040505.

引用本文的文献

1
Gene expression dynamics before and after zygotic gene activation in early embryogenesis.早期胚胎发育中合子基因激活前后的基因表达动态
iScience. 2025 Aug 7;28(9):113272. doi: 10.1016/j.isci.2025.113272. eCollection 2025 Sep 19.
2
Epigenetic inheritance and gene expression regulation in early Drosophila embryos.早期果蝇胚胎中的表观遗传遗传和基因表达调控。
EMBO Rep. 2024 Oct;25(10):4131-4152. doi: 10.1038/s44319-024-00245-z. Epub 2024 Sep 16.
3
Heat tolerance, oxidative stress response tuning and robust gene activation in early-stage embryos.

本文引用的文献

1
ME31B globally represses maternal mRNAs by two distinct mechanisms during the maternal-to-zygotic transition.ME31B 在母胎向合子的过渡过程中通过两种不同的机制全局抑制母体 mRNA。
Elife. 2017 Sep 6;6:e27891. doi: 10.7554/eLife.27891.
2
Parthenogenesis in Insects: The Centriole Renaissance.昆虫孤雌生殖:中心粒的复兴
Results Probl Cell Differ. 2017;63:435-479. doi: 10.1007/978-3-319-60855-6_19.
3
Data for the generation of RNA spatiotemporal distributions and interpretation of Chk1 and SLBP protein depletion phenotypes during embryogenesis.
早期胚胎的耐热性、氧化应激响应调节和稳健的基因激活。
Proc Biol Sci. 2024 Aug;291(2029):20240973. doi: 10.1098/rspb.2024.0973. Epub 2024 Aug 21.
4
A transcriptomic examination of encased rotifer embryos reveals the developmental trajectory leading to long-term dormancy; are they "animal seeds"?对被包裹的轮虫胚胎进行转录组学研究揭示了导致长期休眠的发育轨迹;它们是“动物种子”吗?
BMC Genomics. 2024 Jan 27;25(1):119. doi: 10.1186/s12864-024-09961-1.
5
CBP and Gcn5 drive zygotic genome activation independently of their catalytic activity.CBP 和 Gcn5 通过其催化活性以外的途径独立驱动合子基因组激活。
Sci Adv. 2023 Apr 21;9(16):eadf2687. doi: 10.1126/sciadv.adf2687.
6
Metal ions in insect reproduction: a crosstalk between reproductive physiology and immunity.昆虫生殖中的金属离子:生殖生理学与免疫之间的串扰。
Curr Opin Insect Sci. 2022 Aug;52:100924. doi: 10.1016/j.cois.2022.100924. Epub 2022 Apr 25.
7
Membrane-actin interactions in morphogenesis: Lessons learned from Drosophila cellularization.形态发生中的膜-肌动蛋白相互作用:从 Drosophila 细胞化中得到的启示。
Semin Cell Dev Biol. 2023 Jan 15;133:107-122. doi: 10.1016/j.semcdb.2022.03.028. Epub 2022 Apr 5.
8
CLAMP regulates zygotic genome activation in Drosophila embryos.CLAMP 调控果蝇胚胎的合子基因组激活。
Genetics. 2021 Oct 2;219(2). doi: 10.1093/genetics/iyab107.
9
The nuclear to cytoplasmic ratio directly regulates zygotic transcription in through multiple modalities.核质比通过多种方式直接调节 中的合子转录。
Proc Natl Acad Sci U S A. 2021 Apr 6;118(14). doi: 10.1073/pnas.2010210118.
10
Multi-level analysis of reproduction in an Antarctic midge identifies female and male accessory gland products that are altered by larval stress and impact progeny viability.南极摇蚊繁殖的多层次分析确定了受幼虫应激影响并影响后代活力的雌性和雄性附腺产物。
Sci Rep. 2020 Nov 13;10(1):19791. doi: 10.1038/s41598-020-76139-6.
胚胎发育过程中用于生成RNA时空分布以及解释Chk1和SLBP蛋白缺失表型的数据。
Data Brief. 2017 May 13;13:28-31. doi: 10.1016/j.dib.2017.05.008. eCollection 2017 Aug.
4
Control of PNG kinase, a key regulator of mRNA translation, is coupled to meiosis completion at egg activation.PNG激酶是mRNA翻译的关键调节因子,其调控与卵子激活时减数分裂的完成相关联。
Elife. 2017 May 30;6:e22219. doi: 10.7554/eLife.22219.
5
Rapid Rates of Pol II Elongation in the Drosophila Embryo.果蝇胚胎中 Pol II 延伸的快速速率。
Curr Biol. 2017 May 8;27(9):1387-1391. doi: 10.1016/j.cub.2017.03.069. Epub 2017 Apr 27.
6
Purification of Zygotically Transcribed RNA through Metabolic Labeling of Early Zebrafish Embryos.通过早期斑马鱼胚胎的代谢标记纯化合子转录RNA
Methods Mol Biol. 2017;1605:121-131. doi: 10.1007/978-1-4939-6988-3_8.
7
Chromatin Architecture Emerges during Zygotic Genome Activation Independent of Transcription.染色质结构在合子基因组激活过程中独立于转录而出现。
Cell. 2017 Apr 6;169(2):216-228.e19. doi: 10.1016/j.cell.2017.03.024.
8
Biochemical Fractionation of Time-Resolved Drosophila Embryos Reveals Similar Transcriptomic Alterations in Replication Checkpoint and Histone mRNA Processing Mutants.时间分辨的果蝇胚胎的生化分离显示,在复制检查点和组蛋白 mRNA 加工突变体中存在相似的转录组改变。
J Mol Biol. 2017 Oct 27;429(21):3264-3279. doi: 10.1016/j.jmb.2017.01.022. Epub 2017 Feb 3.
9
The timing of zygotic genome activation.合子基因组激活的时间
Curr Opin Genet Dev. 2017 Apr;43:53-60. doi: 10.1016/j.gde.2016.12.001. Epub 2017 Jan 12.
10
mRNA localises to the oocyte anterior by random Dynein-mediated transport and anchoring.信使核糖核酸(mRNA)通过动力蛋白介导的随机运输和锚定作用定位于卵母细胞的前部。
Elife. 2016 Oct 28;5:e17537. doi: 10.7554/eLife.17537.