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种群中老龄个体的存在加速并优化选择过程:计算机模拟实验

Presence of Old Individuals in a Population Accelerates and Optimizes the Process of Selection: in silico Experiments.

作者信息

Chistyakov V A, Denisenko Y V, Bren A B

机构信息

Southern Federal University, Ivanovsky Academy of Biology and Biotechnology, Institute of Biology, Rostov-on-Don, 344090, Russia.

出版信息

Biochemistry (Mosc). 2018 Feb;83(2):159-167. doi: 10.1134/S0006297918020086.

Abstract

One of the important components of the concept of aging-phenoptosis (programmed aging) is the notion of aging as an accelerator of evolution having the rank of subconcept. For many reasons, the main being the problematic experimental testing of evolutionary hypotheses, verification of the above-mentioned subconcept can be based primarily on analysis of the internal inconsistency of heuristic models and their correspondence to undisputedly observed facts. To illustrate the acceleration mechanism, and most importantly to structure the evolutionary process in communities that include naturally weakened individuals, V. P. Skulachev offered in 2003 a conceptual model that he later called a "fable about hares". Despite its simplicity, this model has undoubted internal logic. The natural trend in the development of conceptual models is their translation into the language of mathematics. The purpose of the present work was to create a variation of the known multi-agent model "predator-prey" that would allow us to "see" how the presence in the prey population of naturally weakened (old) members stimulates the selection of individuals with traits whose adaptive potential is not devaluated with age. The model (http://homebear.ru/PD) was developed on the Java platform, version 6, NetBeans development environment 8.2. Statistical analysis and preparation of illustrative materials were carried out using environment R, version 3.4.1. The results of numerical experiments set using our model correspond in principle to the provisions of the heuristic model of Skulachev and, consequently, confirm the absence in it of logical contradictions.

摘要

衰老-自然凋亡(程序性衰老)概念的重要组成部分之一是,将衰老视为具有子概念地位的进化加速器这一观念。由于诸多原因,主要是进化假说的实验验证存在问题,上述子概念的验证主要可基于对启发式模型内部不一致性的分析及其与无可争议的观察事实的相符性。为了阐释加速机制,最重要的是为了构建包含自然衰弱个体的群落中的进化过程结构,V. P. 斯库拉乔夫在2003年提出了一个概念模型,他后来将其称为“野兔寓言”。尽管该模型简单,但具有毋庸置疑的内在逻辑。概念模型发展的自然趋势是将其转化为数学语言。本研究的目的是创建一个已知的多智能体模型“捕食者-猎物”的变体,使我们能够“看到”猎物群体中自然衰弱(年老)成员的存在如何刺激对具有随年龄适应性潜力不贬值特征的个体的选择。该模型(http://homebear.ru/PD)是在Java平台6版、NetBeans开发环境8.2上开发的。使用R环境3.4.1版进行统计分析和制作说明材料。使用我们的模型进行的数值实验结果原则上与斯库拉乔夫启发式模型的规定相符,因此证实了该模型不存在逻辑矛盾。

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