Department of Cardiology, The Second Affiliated Hospital of Harbin Medical University, Harbin, Heilongjiang 150001, P.R. China.
Mol Med Rep. 2018 Jun;17(6):7585-7594. doi: 10.3892/mmr.2018.8834. Epub 2018 Mar 29.
Dendritic cells (DCs) serve crucial roles in the activation of the immune response, and imbalance in the activation or inhibition of DCs has been associated with an increased susceptibility to develop immune‑induced diseases. However, the molecular mechanisms of regulating immune‑induced diseases of DCs are not well understood. The aim of the present study was to identify the gene signatures and uncover the potential regulatory mechanisms in DCs. A total of 4 gene expression profiles (GSE52894, GSE72893, GSE75938 and GSE77969) were integrated and analyzed in depth. In total, 241 upregulated genes and 365 downregulated genes were detected. Gene ontology and pathway enrichment analysis showed that the differentially expressed genes (DEGs) were significantly enriched in the inflammatory response, the tumor necrosis factor (TNF) signaling pathway, the nuclear factor (NF)‑κB signaling pathway and antigen processing. The top 10 hub genes were identified from the protein‑protein analysis. The most significant 2 modules were filtered from the protein‑protein network. The genes in 2 modules were involved in type I interferon signaling, the NF‑κB signaling pathway and the TNF signaling pathway. Furthermore, the microRNA‑mRNA network analysis was performed. The results of the present study revealed that the identified DEGs and pathways may improve our understanding of the mechanisms of the maturation of DCs, and the candidate hub genes that may be therapeutic targets for immune‑induced diseases.
树突状细胞 (DCs) 在激活免疫反应中发挥着至关重要的作用,而 DCs 的激活或抑制失衡与免疫诱导性疾病的易感性增加有关。然而,调节 DCs 免疫诱导性疾病的分子机制尚不清楚。本研究旨在鉴定 DCs 中与免疫诱导性疾病相关的基因特征,并揭示其潜在的调控机制。对 4 个基因表达谱(GSE52894、GSE72893、GSE75938 和 GSE77969)进行了深入的整合和分析。共检测到 241 个上调基因和 365 个下调基因。基因本体论和通路富集分析表明,差异表达基因(DEGs)在炎症反应、肿瘤坏死因子(TNF)信号通路、核因子(NF)-κB 信号通路和抗原处理中显著富集。从蛋白质-蛋白质分析中确定了前 10 个枢纽基因。从蛋白质-蛋白质网络中筛选出最显著的 2 个模块。这 2 个模块中的基因参与了 I 型干扰素信号、NF-κB 信号通路和 TNF 信号通路。此外,还进行了 microRNA-mRNA 网络分析。本研究的结果表明,鉴定的 DEGs 和通路可能有助于我们理解 DCs 成熟的机制,以及候选枢纽基因可能成为免疫诱导性疾病的治疗靶点。