• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

通过生物信息学分析鉴定调节树突状细胞免疫诱导性疾病的关键基因和通路。

Identification of key genes and pathways in regulating immune‑induced diseases of dendritic cells by bioinformatic analysis.

机构信息

Department of Cardiology, The Second Affiliated Hospital of Harbin Medical University, Harbin, Heilongjiang 150001, P.R. China.

出版信息

Mol Med Rep. 2018 Jun;17(6):7585-7594. doi: 10.3892/mmr.2018.8834. Epub 2018 Mar 29.

DOI:10.3892/mmr.2018.8834
PMID:29620200
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC5983944/
Abstract

Dendritic cells (DCs) serve crucial roles in the activation of the immune response, and imbalance in the activation or inhibition of DCs has been associated with an increased susceptibility to develop immune‑induced diseases. However, the molecular mechanisms of regulating immune‑induced diseases of DCs are not well understood. The aim of the present study was to identify the gene signatures and uncover the potential regulatory mechanisms in DCs. A total of 4 gene expression profiles (GSE52894, GSE72893, GSE75938 and GSE77969) were integrated and analyzed in depth. In total, 241 upregulated genes and 365 downregulated genes were detected. Gene ontology and pathway enrichment analysis showed that the differentially expressed genes (DEGs) were significantly enriched in the inflammatory response, the tumor necrosis factor (TNF) signaling pathway, the nuclear factor (NF)‑κB signaling pathway and antigen processing. The top 10 hub genes were identified from the protein‑protein analysis. The most significant 2 modules were filtered from the protein‑protein network. The genes in 2 modules were involved in type I interferon signaling, the NF‑κB signaling pathway and the TNF signaling pathway. Furthermore, the microRNA‑mRNA network analysis was performed. The results of the present study revealed that the identified DEGs and pathways may improve our understanding of the mechanisms of the maturation of DCs, and the candidate hub genes that may be therapeutic targets for immune‑induced diseases.

摘要

树突状细胞 (DCs) 在激活免疫反应中发挥着至关重要的作用,而 DCs 的激活或抑制失衡与免疫诱导性疾病的易感性增加有关。然而,调节 DCs 免疫诱导性疾病的分子机制尚不清楚。本研究旨在鉴定 DCs 中与免疫诱导性疾病相关的基因特征,并揭示其潜在的调控机制。对 4 个基因表达谱(GSE52894、GSE72893、GSE75938 和 GSE77969)进行了深入的整合和分析。共检测到 241 个上调基因和 365 个下调基因。基因本体论和通路富集分析表明,差异表达基因(DEGs)在炎症反应、肿瘤坏死因子(TNF)信号通路、核因子(NF)-κB 信号通路和抗原处理中显著富集。从蛋白质-蛋白质分析中确定了前 10 个枢纽基因。从蛋白质-蛋白质网络中筛选出最显著的 2 个模块。这 2 个模块中的基因参与了 I 型干扰素信号、NF-κB 信号通路和 TNF 信号通路。此外,还进行了 microRNA-mRNA 网络分析。本研究的结果表明,鉴定的 DEGs 和通路可能有助于我们理解 DCs 成熟的机制,以及候选枢纽基因可能成为免疫诱导性疾病的治疗靶点。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5940/5983944/2e11ba42da02/MMR-17-06-7585-g06.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5940/5983944/cef4448d055d/MMR-17-06-7585-g00.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5940/5983944/fb2a195f696c/MMR-17-06-7585-g01.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5940/5983944/f324848539ea/MMR-17-06-7585-g02.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5940/5983944/f1a1477cc21d/MMR-17-06-7585-g03.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5940/5983944/5510da1a523f/MMR-17-06-7585-g04.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5940/5983944/fb40541aad9e/MMR-17-06-7585-g05.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5940/5983944/2e11ba42da02/MMR-17-06-7585-g06.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5940/5983944/cef4448d055d/MMR-17-06-7585-g00.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5940/5983944/fb2a195f696c/MMR-17-06-7585-g01.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5940/5983944/f324848539ea/MMR-17-06-7585-g02.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5940/5983944/f1a1477cc21d/MMR-17-06-7585-g03.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5940/5983944/5510da1a523f/MMR-17-06-7585-g04.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5940/5983944/fb40541aad9e/MMR-17-06-7585-g05.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5940/5983944/2e11ba42da02/MMR-17-06-7585-g06.jpg

相似文献

1
Identification of key genes and pathways in regulating immune‑induced diseases of dendritic cells by bioinformatic analysis.通过生物信息学分析鉴定调节树突状细胞免疫诱导性疾病的关键基因和通路。
Mol Med Rep. 2018 Jun;17(6):7585-7594. doi: 10.3892/mmr.2018.8834. Epub 2018 Mar 29.
2
Integrated bioinformatics analysis reveals key candidate genes and pathways in breast cancer.整合生物信息学分析揭示乳腺癌的关键候选基因和途径。
Mol Med Rep. 2018 Jun;17(6):8091-8100. doi: 10.3892/mmr.2018.8895. Epub 2018 Apr 19.
3
Bioinformatics analysis of fibroblasts exposed to TGF‑β at the early proliferation phase of wound repair.成纤维细胞在伤口修复早期增殖阶段暴露于 TGF-β 后的生物信息学分析。
Mol Med Rep. 2017 Dec;16(6):8146-8154. doi: 10.3892/mmr.2017.7619. Epub 2017 Sep 26.
4
Comprehensive Bioinformatics Analysis of the Immune Mechanism of Dendritic Cells Against Measles Virus.全面的生物信息学分析树突状细胞对抗麻疹病毒的免疫机制。
Med Sci Monit. 2019 Feb 1;25:903-912. doi: 10.12659/MSM.912949.
5
Integrated analysis of differentially expressed genes and pathways in triple‑negative breast cancer.三阴性乳腺癌中差异表达基因和通路的综合分析
Mol Med Rep. 2017 Mar;15(3):1087-1094. doi: 10.3892/mmr.2017.6101. Epub 2017 Jan 4.
6
Analysis of NFKB2‑mediated regulation of mechanisms underlying the development of Hodgkin's lymphoma.分析 NFKB2 介导的调节机制在霍奇金淋巴瘤发展中的作用。
Mol Med Rep. 2018 Jun;17(6):8129-8136. doi: 10.3892/mmr.2018.8911. Epub 2018 Apr 20.
7
Identification of key pathogenic genes of sepsis based on the Gene Expression Omnibus database.基于基因表达综合数据库鉴定脓毒症的关键致病基因。
Mol Med Rep. 2018 Feb;17(2):3042-3054. doi: 10.3892/mmr.2017.8258. Epub 2017 Dec 12.
8
Delineating the underlying molecular mechanisms and key genes involved in metastasis of colorectal cancer via bioinformatics analysis.通过生物信息学分析,阐明结直肠癌转移涉及的潜在分子机制和关键基因。
Oncol Rep. 2018 May;39(5):2297-2305. doi: 10.3892/or.2018.6303. Epub 2018 Mar 8.
9
Identification of key genes and pathways associated with classical Hodgkin lymphoma by bioinformatics analysis.基于生物信息学分析鉴定经典霍奇金淋巴瘤相关的关键基因和通路。
Mol Med Rep. 2017 Oct;16(4):4685-4693. doi: 10.3892/mmr.2017.7158. Epub 2017 Aug 3.
10
Analysis of the protein-protein interaction networks of differentially expressed genes in pulmonary embolism.肺栓塞中差异表达基因的蛋白质-蛋白质相互作用网络分析
Mol Med Rep. 2015 Apr;11(4):2527-33. doi: 10.3892/mmr.2014.3006. Epub 2014 Nov 26.

引用本文的文献

1
The two-stage molecular scenery of SARS-CoV-2 infection with implications to disease severity: An in-silico quest.SARS-CoV-2 感染的两阶段分子景观及其对疾病严重程度的影响:一项计算机模拟研究。
Front Immunol. 2023 Nov 21;14:1251067. doi: 10.3389/fimmu.2023.1251067. eCollection 2023.
2
Memory and naïve gamma delta regulatory T-cell gene expression in the first 24-weeks of peanut oral immunotherapy.花生口服免疫治疗的前 24 周内的记忆和幼稚γδ调节性 T 细胞基因表达。
Clin Immunol. 2021 Sep;230:108820. doi: 10.1016/j.clim.2021.108820. Epub 2021 Aug 6.
3
Genetic perturbation of IFN-α transcriptional modulators in human endothelial cells uncovers pivotal regulators of angiogenesis.

本文引用的文献

1
Critical Role of Plasmacytoid Dendritic Cells in Regulating Gene Expression and Innate Immune Responses to Human Rhinovirus-16.浆细胞样树突状细胞在调节基因表达和对人鼻病毒16型的固有免疫反应中的关键作用。
Front Immunol. 2017 Oct 25;8:1351. doi: 10.3389/fimmu.2017.01351. eCollection 2017.
2
HIV-antibody complexes enhance production of type I interferon by plasmacytoid dendritic cells.HIV 抗体复合物增强浆细胞样树突状细胞产生 I 型干扰素。
J Clin Invest. 2017 Dec 1;127(12):4352-4364. doi: 10.1172/JCI95375. Epub 2017 Oct 30.
3
NFAT1 Regulates Systemic Autoimmunity through the Modulation of a Dendritic Cell Property.
对人内皮细胞中IFN-α转录调节因子进行基因干扰,发现了血管生成的关键调节因子。
Comput Struct Biotechnol J. 2020 Dec 2;18:3977-3986. doi: 10.1016/j.csbj.2020.11.048. eCollection 2020.
4
Construction and analysis of the lncRNA‑miRNA‑mRNA network based on competitive endogenous RNA reveals functional genes in heart failure.基于竞争性内源性 RNA 的 lncRNA-miRNA-mRNA 网络的构建与分析揭示心力衰竭中的功能基因。
Mol Med Rep. 2019 Feb;19(2):994-1003. doi: 10.3892/mmr.2018.9734. Epub 2018 Dec 10.
NFAT1通过调节树突状细胞特性来调控系统性自身免疫。
J Immunol. 2017 Nov 1;199(9):3051-3062. doi: 10.4049/jimmunol.1700882. Epub 2017 Sep 29.
4
NOX5 and p22phox are 2 novel regulators of human monocytic differentiation into dendritic cells.NOX5 和 p22phox 是调控人单核细胞向树突状细胞分化的 2 个新型调节子。
Blood. 2017 Oct 12;130(15):1734-1745. doi: 10.1182/blood-2016-10-746347. Epub 2017 Aug 22.
5
Angiotensin II Regulates Dendritic Cells through Activation of NF-κB /p65, ERK1/2 and STAT1 Pathways.血管紧张素II通过激活NF-κB/p65、ERK1/2和STAT1信号通路调控树突状细胞。
Cell Physiol Biochem. 2017;42(4):1550-1558. doi: 10.1159/000479272. Epub 2017 Jul 19.
6
Predicting novel genes and pathways associated with osteosarcoma by using bioinformatics analysis.利用生物信息学分析预测与骨肉瘤相关的新基因和通路。
Gene. 2017 Sep 10;628:32-37. doi: 10.1016/j.gene.2017.06.058. Epub 2017 Jul 4.
7
MicroRNA-34a dependent regulation of AXL controls the activation of dendritic cells in inflammatory arthritis.微小 RNA-34a 依赖的 AXL 调控控制炎症性关节炎中树突状细胞的激活。
Nat Commun. 2017 Jun 22;8:15877. doi: 10.1038/ncomms15877.
8
Human Leukocyte Antigen F Presents Peptides and Regulates Immunity through Interactions with NK Cell Receptors.人类白细胞抗原F呈递肽段并通过与自然杀伤细胞受体相互作用来调节免疫。
Immunity. 2017 Jun 20;46(6):1018-1029.e7. doi: 10.1016/j.immuni.2017.06.002.
9
A novel immune biomarker discriminates between influenza and bacteria in patients with suspected respiratory infection.一种新型免疫生物标志物可区分疑似呼吸道感染患者的流感和细菌感染。
Eur Respir J. 2017 Jun 15;49(6). doi: 10.1183/13993003.02098-2016. Print 2017 Jun.
10
Identification of Key Candidate Genes and Pathways in Colorectal Cancer by Integrated Bioinformatical Analysis.综合生物信息学分析鉴定结直肠癌的关键候选基因和途径。
Int J Mol Sci. 2017 Mar 28;18(4):722. doi: 10.3390/ijms18040722.