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两种多重聚合酶链反应-高分辨率熔解曲线分析方法用于空肠弯曲菌和结肠弯曲菌种内鉴别评估

Evaluation of Two Multiplex PCR-High-Resolution Melt Curve Analysis Methods for Differentiation of Campylobacter jejuni and Campylobacter coli Intraspecies.

作者信息

Banowary Banya, Dang Van Tuan, Sarker Subir, Connolly Joanne H, Chenu Jeremy, Groves Peter, Raidal Shane, Ghorashi Seyed Ali

机构信息

A School of Animal and Veterinary Sciences, Charles Sturt University, Wagga Wagga, New South Wales, Australia 2678.

C School of Life Sciences, La Trobe University, Melbourne, Victoria, Australia 3086.

出版信息

Avian Dis. 2018 Mar;62(1):86-93. doi: 10.1637/11739-080417-Reg.1.

Abstract

Campylobacter infection is a common cause of bacterial gastroenteritis in humans and remains a significant global public health issue. The capability of two multiplex PCR (mPCR)-high-resolution melt (HRM) curve analysis methods (i.e., mPCR1-HRM and mPCR2-HRM) to detect and differentiate 24 poultry isolates and three reference strains of Campylobacter jejuni and Campylobacter coli was investigated. Campylobacter jejuni and C. coli were successfully differentiated in both assays, but the differentiation power of mPCR2-HRM targeting the cadF gene was found superior to that of mPCR1-HRM targeting the gpsA gene or a hypothetical protein gene. However, higher intraspecies variation within C. coli and C. jejuni isolates was detected in mPCR1-HRM when compared with mPCR2-HRM. Both assays were rapid and required minimum interpretation skills for discrimination between and within Campylobacter species when using HRM curve analysis software.

摘要

弯曲杆菌感染是人类细菌性肠胃炎的常见病因,仍是一个重大的全球公共卫生问题。研究了两种多重聚合酶链反应(mPCR)-高分辨率熔解(HRM)曲线分析方法(即mPCR1-HRM和mPCR2-HRM)检测和区分24株家禽分离株以及空肠弯曲杆菌和结肠弯曲杆菌三种参考菌株的能力。在两种检测中均成功区分了空肠弯曲杆菌和结肠弯曲杆菌,但发现靶向cadF基因的mPCR2-HRM的区分能力优于靶向gpsA基因或一个假定蛋白基因的mPCR1-HRM。然而,与mPCR2-HRM相比,mPCR1-HRM检测到结肠弯曲杆菌和空肠弯曲杆菌分离株内更高的种内变异。当使用HRM曲线分析软件时,两种检测都很快速,并且在弯曲杆菌种间和种内进行区分时所需的解读技能最少。

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