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弱种群结构和无遗传侵蚀的金琥:来自巴西东部的微型特有和受威胁仙人掌物种。

Weak population structure and no genetic erosion in Pilosocereus aureispinus: A microendemic and threatened cactus species from eastern Brazil.

机构信息

Departamento de Biologia, Universidade Federal de São Carlos, Sorocaba, São Paulo, Brazil.

出版信息

PLoS One. 2018 Apr 9;13(4):e0195475. doi: 10.1371/journal.pone.0195475. eCollection 2018.

Abstract

Succulent cacti (Cactaceae) are among the most threatened taxonomic groups assessed to date. Here we evaluated the genetic diversity and population structure of a narrow endemic columnar cactus Pilosocereus aureispinus. This species is only found in a small area of c. 300 km2 of rocky savanna from eastern Brazil and it is currently classified as vulnerable (VU) on the International Union for Conservation of Nature (IUCN) red list. Eight microsatellite loci were genotyped for 91 individuals from four localities of the known P. aureispinus range. In contrast with expectations for narrow endemic species, we found relatively high levels of genetic diversity (e.g., HE = 0.390 to 0.525; HO = 0.394 to 0.572) and very low population structure based on the variation of six loci. All the analyzed individuals were clustered in one unique genetic group in assignment tests. We also generated the sequences of two plastid markers (trnT-trnL and psbD-trnT) and found no variation on a subsample of 39 individuals. We used Landsat 8 images and Normalized Difference Vegetation Index to estimate a potential extent of occurrence of c. 750 km2 for this species. Our results showed that P. aureispinus is not suffering from erosion of nuclear genetic variability due to its narrow distribution. However, we advocate that because of the extremely limited extent of occurrence, the ongoing anthropogenic disturbances in its habitat, and phylogenetic distinctiveness of P. aureispinus, this species should be classified as endangered (EN) on the IUCN Red List.

摘要

肉质仙人掌(仙人掌科)是迄今为止评估的受威胁程度最高的分类群之一。在这里,我们评估了一种狭窄特有柱状仙人掌——Pilosocereus aureispinus 的遗传多样性和种群结构。该物种仅在巴西东部一个约 300 平方公里的岩石热带稀树草原小区域中发现,目前在国际自然保护联盟(IUCN)红色名录中被列为易危(VU)。我们对来自已知 P. aureispinus 范围的四个地点的 91 个个体的 8 个微卫星基因座进行了基因分型。与对狭窄特有物种的预期相反,我们发现相对较高的遗传多样性水平(例如,HE = 0.390 至 0.525;HO = 0.394 至 0.572)和基于六个基因座的变异的非常低的种群结构。在分配测试中,所有分析的个体都聚集在一个独特的遗传群体中。我们还生成了两个质体标记(trnT-trnL 和 psbD-trnT)的序列,并在 39 个个体的子样本中未发现变异。我们使用 Landsat 8 图像和归一化差异植被指数估计了该物种的潜在发生范围约为 750 平方公里。我们的研究结果表明,由于分布狭窄,P. aureispinus 的核遗传变异没有受到侵蚀。然而,我们主张,由于发生范围极其有限,其栖息地正在进行的人为干扰以及 P. aureispinus 的系统发育独特性,该物种应在 IUCN 红色名录中被列为濒危(EN)。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fad8/5890996/8014a0acecf7/pone.0195475.g001.jpg

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