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对嵌入细胞质溶胶中的交联肌动蛋白网络进行多尺度有限元模拟,重点关注细丝取向。

Multiscale FEM simulations of cross-linked actin network embedded in cytosol with the focus on the filament orientation.

作者信息

Klinge S, Aygün S, Gilbert R P, Holzapfel G A

机构信息

Institute of Mechanics, TU Dortmund University, Dortmund, 44227, Germany.

Department of Mathematical Sciences, University of Delaware, Newark, Delaware, 19716, USA.

出版信息

Int J Numer Method Biomed Eng. 2018 Jul;34(7):e2993. doi: 10.1002/cnm.2993. Epub 2018 May 17.

Abstract

The present contribution focuses on the application of the multiscale finite element method to the modeling of actin networks that are embedded in the cytosol. These cell components are of particular importance with regard to the cell response to external stimuli. The homogenization strategy chosen uses the Hill-Mandel macrohomogeneity condition for bridging 2 scales: the macroscopic scale that is related to the cell level and the microscopic scale related to the representative volume element. For the modeling of filaments, the Holzapfel-Ogden β-model is applied. It provides a relationship between the tensile force and the caused stretches, serves as the basis for the derivation of the stress and elasticity tensors, and enables a novel finite element implementation. The elements with the neo-Hookean constitutive law are applied for the simulation of the cytosol. The results presented corroborate the main advantage of the concept, namely, its flexibility with regard to the choice of the representative volume element as well as of macroscopic tests. The focus is particularly placed on the study of the filament orientation and of its influence on the effective behavior.

摘要

本文着重探讨多尺度有限元方法在模拟嵌入细胞质中的肌动蛋白网络方面的应用。这些细胞成分对于细胞对外部刺激的反应尤为重要。所采用的均匀化策略利用希尔 - 曼德尔宏观均匀性条件来衔接两个尺度:与细胞水平相关的宏观尺度和与代表性体积单元相关的微观尺度。对于细丝建模,应用了霍尔扎佩尔 - 奥格登β模型。它提供了拉力与所产生拉伸之间的关系,作为推导应力和弹性张量的基础,并实现了一种新颖的有限元实现方式。采用新胡克本构定律的单元用于细胞质的模拟。所呈现的结果证实了该概念的主要优势,即其在选择代表性体积单元以及宏观测试方面的灵活性。特别关注细丝取向及其对有效行为影响的研究。

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