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来自点状念珠藻PtxD趋光性调节因子的橙色/绿色蓝细菌视蛋白功率传感器NpF2164g7的非经典光动力学

Noncanonical Photodynamics of the Orange/Green Cyanobacteriochrome Power Sensor NpF2164g7 from the PtxD Phototaxis Regulator of Nostoc punctiforme.

作者信息

Kirpich Julia S, Chang Che-Wei, Madsen Dorte, Gottlieb Sean M, Martin Shelley S, Rockwell Nathan C, Lagarias J Clark, Larsen Delmar S

出版信息

Biochemistry. 2018 May 8;57(18):2636-2648. doi: 10.1021/acs.biochem.7b01252. Epub 2018 Apr 23.

Abstract

Forward and reverse primary (<10 ns) and secondary (>10 ns) photodynamics of cyanobacteriochrome (CBCR) NpF2164g7 were characterized by global analysis of ultrafast broadband transient absorption measurements. NpF2164g7 is the most C-terminal bilin-binding GAF domain in the Nostoc punctiforme phototaxis sensor PtxD (locus Npun_F2164). Although a member of the canonical red/green CBCR subfamily phylogenetically, NpF2164g7 exhibits an orange-absorbing P dark-adapted state instead of the typical red-absorbing P dark-adapted state characteristic of this subfamily. The green-absorbing P photoproduct of NpF2164g7 is unstable, allowing this CBCR domain to function as a power sensor. Photoexcitation of the P state triggers inhomogeneous excited-state dynamics with three spectrally and temporally distinguishable pathways to generate the light-adapted P state in high yield (estimated at 25-30%). Although observed in other CBCR domains, the inhomogeneity in NpF2164g7 extends far into secondary relaxation dynamics (10 ns -1 ms) through to formation of P. In the reverse direction, the primary dynamics after photoexcitation of P are qualitatively similar to those of other red/green CBCRs, but secondary dynamics involve a "pre-equilibrium" step before regenerating P. The anomalous photodynamics of NpF2164g7 may reflect an evolutionary adaptation of CBCR sensors that function as broadband light intensity sensors.

摘要

通过对超快宽带瞬态吸收测量进行全局分析,表征了蓝细菌视紫红质(CBCR)NpF2164g7的正向和反向初级(<10 ns)和次级(>10 ns)光动力学。NpF2164g7是点状念珠藻趋光性传感器PtxD(基因座Npun_F2164)中最C端的胆色素结合GAF结构域。尽管在系统发育上属于典型的红/绿CBCR亚家族成员,但NpF2164g7表现出橙色吸收的P暗适应状态,而不是该亚家族典型的红色吸收P暗适应状态。NpF2164g7的绿色吸收P光产物不稳定,使得该CBCR结构域能够作为功率传感器发挥作用。P态的光激发触发了非均匀的激发态动力学,具有三种在光谱和时间上可区分的途径,以高产率(估计为25%-30%)产生光适应的P态。尽管在其他CBCR结构域中也观察到了这种情况,但NpF2164g7中的非均匀性一直延伸到次级弛豫动力学(10 ns - 1 ms)直至P的形成。在反向过程中,P光激发后的初级动力学在性质上与其他红/绿CBCR相似,但次级动力学在再生P之前涉及一个“预平衡”步骤。NpF2164g7的异常光动力学可能反映了作为宽带光强传感器的CBCR传感器的进化适应性。

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