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两种高度相似的经典红/绿藻胆体正向和逆向光循环动力学的比较揭示了出人意料的差异。

Comparison of the Forward and Reverse Photocycle Dynamics of Two Highly Similar Canonical Red/Green Cyanobacteriochromes Reveals Unexpected Differences.

机构信息

Department of Chemistry, University of California, Davis, One Shields Ave, Davis, California 95616, United States.

Institut für Chemie, Technische Universität Berlin, Sekr. PC14, Straße des 17 Juni 135, D-10623 Berlin, Germany.

出版信息

Biochemistry. 2021 Feb 2;60(4):274-288. doi: 10.1021/acs.biochem.0c00796. Epub 2021 Jan 13.

Abstract

Cyanobacteriochromes (CBCRs) are cyanobacterial photoreceptors that exhibit photochromism between two states: a thermally stable dark-adapted state and a metastable light-adapted state with bound linear tetrapyrrole (bilin) chromophores possessing 15 and 15 configurations, respectively. The photodynamics of canonical red/green CBCRs have been extensively studied; however, the time scales of their excited-state lifetimes and subsequent ground-state evolution rates widely differ and, at present, remain difficult to predict. Here, we compare the photodynamics of two closely related red/green CBCRs that have substantial sequence identity (∼68%) and similar chromophore environments: AnPixJg2 from sp. PCC 7120 and NpR6012g4 from . Using broadband transient absorption spectroscopy on the primary (125 fs to 7 ns) and secondary (7 ns to 10 ms) time scales together with global analysis modeling, our studies revealed that AnPixJg2 and NpR6012g4 have comparable quantum yields for initiating the forward (P → P) and reverse (P → P) reactions, which proceed through monotonic and nonmonotonic mechanisms, respectively. In addition to small discrepancies in the kinetics, the secondary reverse dynamics resolved unique features for each domain: intermediate shunts in NpR6012g4 and a Meta-G intermediate red-shifted from the P photoproduct in AnPixJg2. Overall, this study supports the conclusion that sequence similarity is a useful criterion for predicting pathways of the light-induced evolution and quantum yield of generating primary intermediate Φ within subfamilies of CBCRs, but more studies are still needed to develop a comprehensive molecular level understanding of these processes.

摘要

蓝藻藻胆体(CBCRs)是一种在两种状态之间表现出光致变色的蓝藻光受体:一种是热稳定的暗适应状态,另一种是亚稳态的光适应状态,分别结合有线性四吡咯(bilin)发色团,其构型分别为 15 和 15。经典的红/绿 CBCRs 的光动力学已得到广泛研究;然而,它们的激发态寿命和随后的基态演化速率的时间尺度差异很大,目前仍然难以预测。在这里,我们比较了两种密切相关的红/绿 CBCRs 的光动力学,它们具有显著的序列同一性(约 68%)和相似的发色团环境:来自 sp. PCC 7120 的 AnPixJg2 和来自. 的 NpR6012g4。使用宽带瞬态吸收光谱在主要(125 fs 到 7 ns)和次要(7 ns 到 10 ms)时间尺度上,以及全局分析建模,我们的研究表明,AnPixJg2 和 NpR6012g4 对于引发正向(P → P)和反向(P → P)反应的量子产率具有可比性,这两种反应分别通过单调和非单调机制进行。除了动力学上的细微差异外,每个结构域的次要反向动力学都有独特的特征:NpR6012g4 中的中间支路和 AnPixJg2 中与 P 光产物相比发生红移的 Meta-G 中间体。总的来说,这项研究支持这样的结论,即序列相似性是预测 CBCRs 亚家族中光诱导演化和生成主要中间体 Φ 的量子产率的途径的有用标准,但仍需要更多的研究来全面了解这些过程。

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