• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

与条纹鲈精子活力相关的 DNA 甲基化图谱。

DNA methylation profiles correlated to striped bass sperm fertility.

机构信息

Department of Animal and Avian Sciences, University of Maryland, College Park, MD, 20742, USA.

College of Animal Science, South China Agricultural University, Guangzhou, GD, 510642, China.

出版信息

BMC Genomics. 2018 Apr 10;19(1):244. doi: 10.1186/s12864-018-4548-6.

DOI:10.1186/s12864-018-4548-6
PMID:29636007
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC5894188/
Abstract

BACKGROUND

Striped bass (Morone saxatilis) spermatozoa are used to fertilize in vitro the eggs of white bass (M. chrysops) to produce the preferred hybrid for the striped bass aquaculture industry. Currently, only one source of domestic striped bass juveniles is available to growers that is not obtained from wild-caught parents and is thus devoid of any genetic improvement in phenotypic traits of importance to aquaculture. Sperm epigenetic modification has been predicted to be associated with fertility, which could switch genes on and off without changing the DNA sequence itself. DNA methylation is one of the most common epigenetic modification types and changes in sperm epigenetics can be correlated to sub-fertility or infertility in male striped bass. The objective of this study was to find the differentially methylated regions (DMRs) between high-fertility and sub-fertility male striped bass, which could potentially regulate the fertility performance.

RESULTS

In our present study, we performed DNA methylation analysis of high-fertility and sub-fertility striped bass spermatozoa through MBD-Seq methods. A total of 171 DMRs were discovered in striped bass sperm correlated to fertility. Based on the annotation of these DMRs, we conducted a functional classification analysis and two important groups of genes including the WDR3/UTP12 and GPCR families, were discovered to be related to fertility performance of striped bass. Proteins from the WDR3/UTP12 family are involved in forming the sperm flagella apparatus in vertebrates and GPCRs are involved in hormonal signaling and regulation of tissue development, proliferation and differentiation.

CONCLUSIONS

Our results contribute insights into understanding the mechanism of fertility in striped bass, which will provide powerful tools to maximize reproductive efficiencies and to identify those males with superior gametes for this important aquaculture species.

摘要

背景

条纹鲈(Morone saxatilis)的精子用于体外受精白鲈(M. chrysops)的卵子,以生产条纹鲈水产养殖行业所需的首选杂交种。目前,养殖者只能获得一种非野生来源的国内条纹鲈幼鱼,因此缺乏对水产养殖重要表型特征的任何遗传改良。精子表观遗传修饰被预测与生育能力有关,它可以在不改变 DNA 序列本身的情况下打开和关闭基因。DNA 甲基化是最常见的表观遗传修饰类型之一,精子表观遗传的变化可能与雄性条纹鲈的亚生育力或不育有关。本研究的目的是找到高生育力和低生育力雄性条纹鲈之间的差异甲基化区域(DMRs),这些区域可能调节生育能力。

结果

在我们目前的研究中,我们通过 MBD-Seq 方法对高生育力和低生育力的条纹鲈精子进行了 DNA 甲基化分析。共发现 171 个与生育力相关的条纹鲈精子 DMRs。基于这些 DMRs 的注释,我们进行了功能分类分析,发现了 WDR3/UTP12 和 GPCR 家族等两个重要的基因群与条纹鲈的生育性能有关。WDR3/UTP12 家族的蛋白质参与脊椎动物精子鞭毛器的形成,而 GPCRs 参与激素信号传递和组织发育、增殖和分化的调节。

结论

我们的研究结果有助于了解条纹鲈生育能力的机制,这将为最大限度地提高繁殖效率提供有力工具,并识别出那些具有优秀配子的雄性,用于这一重要的水产养殖物种。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c71f/5894188/38c1e9273c17/12864_2018_4548_Fig4_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c71f/5894188/0096b80da5bc/12864_2018_4548_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c71f/5894188/74b809ed4863/12864_2018_4548_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c71f/5894188/5ef2d174fe01/12864_2018_4548_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c71f/5894188/38c1e9273c17/12864_2018_4548_Fig4_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c71f/5894188/0096b80da5bc/12864_2018_4548_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c71f/5894188/74b809ed4863/12864_2018_4548_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c71f/5894188/5ef2d174fe01/12864_2018_4548_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c71f/5894188/38c1e9273c17/12864_2018_4548_Fig4_HTML.jpg

相似文献

1
DNA methylation profiles correlated to striped bass sperm fertility.与条纹鲈精子活力相关的 DNA 甲基化图谱。
BMC Genomics. 2018 Apr 10;19(1):244. doi: 10.1186/s12864-018-4548-6.
2
Transcriptome annotation and marker discovery in white bass (Morone chrysops) and striped bass (Morone saxatilis).白鲈(Morone chrysops)和条纹鲈(Morone saxatilis)的转录组注释与标记发现
Anim Genet. 2014 Dec;45(6):885-7. doi: 10.1111/age.12211. Epub 2014 Aug 26.
3
The effect of freezing rate on the quality of striped bass sperm.冻结速率对条纹鲈精子质量的影响。
Theriogenology. 2013 Apr 1;79(6):940-5. doi: 10.1016/j.theriogenology.2013.01.009. Epub 2013 Feb 18.
4
Quantitative comparison of the stress response of striped bass (Morone saxatilis) and hybrid striped bass (Morone saxatilis x Morone chrysops and Morone saxatilis x Morone americana).条纹鲈(Morone saxatilis)与杂交条纹鲈(Morone saxatilis×Morone chrysops以及Morone saxatilis×Morone americana)应激反应的定量比较
Am J Vet Res. 1994 Mar;55(3):405-9.
5
Effects of frozen and liquid hypothermic storage and extender type on calcium homeostasis in relation to viability and ATP content in striped bass (Morone saxatilis) sperm.冷冻和液体低温保存以及 extender 类型对条纹鲈(Morone saxatilis)精子钙稳态以及活力和 ATP 含量的影响。
Theriogenology. 2014 May;81(8):1085-91. doi: 10.1016/j.theriogenology.2014.01.035. Epub 2014 Jan 31.
6
Effects of osmolality on inner mitochondrial transmembrane potential and ATP content in spermatozoa recovered from the testes of striped bass (Morone saxatilis).渗透压对从条纹鲈(Morone saxatilis)睾丸中回收的精子线粒体内膜跨膜电位和ATP含量的影响。
Theriogenology. 2008 May;69(8):1007-12. doi: 10.1016/j.theriogenology.2008.01.021. Epub 2008 Mar 24.
7
Combinatorial metabolomic and transcriptomic analysis of muscle growth in hybrid striped bass (female white bass Morone chrysops x male striped bass M. saxatilis).杂交条纹鲈(雌性白鲈 Morone chrysops 与雄性条纹鲈 M. saxatilis)肌肉生长的组合代谢组学和转录组学分析。
BMC Genomics. 2024 Jun 10;25(1):580. doi: 10.1186/s12864-024-10325-y.
8
Freezing response and optimal cooling rates for cryopreserving sperm cells of striped bass, Morone saxatilis.条纹鲈(Morone saxatilis)精子细胞冷冻保存的冷冻反应及最佳冷却速率
Theriogenology. 2006 Sep 1;66(4):964-73. doi: 10.1016/j.theriogenology.2006.02.035. Epub 2006 Mar 29.
9
Hepatic transcriptomic and metabolic responses of hybrid striped bass (Morone saxatilis×Morone chrysops) to acute and chronic hypoxic insult.杂交条纹鲈(条纹鲈×金眼鲈)对急性和慢性低氧损伤的肝脏转录组和代谢反应
Comp Biochem Physiol Part D Genomics Proteomics. 2016 Jun;18:1-9. doi: 10.1016/j.cbd.2016.01.005. Epub 2016 Jan 21.
10
Activation of sperm motility in striped bass via a cAMP-independent pathway.通过一条不依赖环磷酸腺苷(cAMP)的途径激活条纹鲈精子的运动能力。
Theriogenology. 2004 May;61(7-8):1487-98. doi: 10.1016/j.theriogenology.2003.08.015.

引用本文的文献

1
Sperm DNA methylation landscape and its links to male fertility in a non-model teleost using EM-seq.利用EM-seq技术解析非模式硬骨鱼精子DNA甲基化图谱及其与雄性生育力的关系
Heredity (Edinb). 2025 May;134(5):293-305. doi: 10.1038/s41437-025-00756-y. Epub 2025 Mar 18.
2
Advancing genetic improvement in the omics era: status and priorities for United States aquaculture.组学时代推进水产养殖遗传改良:美国水产养殖的现状与优先事项
BMC Genomics. 2025 Feb 17;26(1):155. doi: 10.1186/s12864-025-11247-z.
3
Insights into Reproduction Through Gonadal Tissue Methylation Analysis and Transcriptomic Integration.

本文引用的文献

1
Human and mouse monocytes display distinct signalling and cytokine profiles upon stimulation with FFAR2/FFAR3 short-chain fatty acid receptor agonists.在用游离脂肪酸受体2/游离脂肪酸受体3短链脂肪酸受体激动剂刺激后,人和小鼠单核细胞表现出不同的信号传导和细胞因子谱。
Sci Rep. 2016 Sep 26;6:34145. doi: 10.1038/srep34145.
2
Genome-wide analysis of DNA methylation in obese, lean, and miniature pig breeds.肥胖、瘦肉型和小型猪品种DNA甲基化的全基因组分析。
Sci Rep. 2016 Jul 22;6:30160. doi: 10.1038/srep30160.
3
Cytosine methylation of sperm DNA in horse semen after cryopreservation.
通过性腺组织甲基化分析和转录组整合深入了解生殖
Biomolecules. 2025 Jan 2;15(1):54. doi: 10.3390/biom15010054.
4
DNA Methylation Mediates Sperm Quality via and Regulation in Japanese Flounder ().DNA 甲基化通过调控和在牙鲆精子中介导精子质量。
Int J Mol Sci. 2024 May 29;25(11):5935. doi: 10.3390/ijms25115935.
5
Broodstock nutritional programming differentially affects the hepatic transcriptome and genome-wide DNA methylome of farmed gilthead sea bream (Sparus aurata) depending on genetic background.亲鱼营养编程根据遗传背景的不同,对养殖的金头鲷(Sparus aurata)的肝脏转录组和全基因组 DNA 甲基组产生差异影响。
BMC Genomics. 2023 Nov 7;24(1):670. doi: 10.1186/s12864-023-09759-7.
6
Sperm quality parameters, fertilizing potential, metabolites, and DNA methylation in cold-stored and cryopreserved milt from Atlantic salmon ( L.).大西洋鲑(L.)冷藏和冷冻精液中的精子质量参数、受精潜力、代谢物及DNA甲基化
Front Genet. 2023 Aug 24;14:1199681. doi: 10.3389/fgene.2023.1199681. eCollection 2023.
7
Chromosome-level assembly and annotation of the blue catfish Ictalurus furcatus, an aquaculture species for hybrid catfish reproduction, epigenetics, and heterosis studies.蓝鳃太阳鱼染色体水平基因组组装和注释,一个用于杂交太阳鱼繁殖、表观遗传学和杂种优势研究的水产养殖品种。
Gigascience. 2022 Jul 9;11. doi: 10.1093/gigascience/giac070.
8
Changes in Phenotypes and DNA Methylation of In Vitro Aging Sperm in Common Carp .鲤鱼体外老化精子的表型和DNA甲基化变化
Int J Mol Sci. 2021 May 31;22(11):5925. doi: 10.3390/ijms22115925.
9
Litter Size of Sheep (): Inbreeding Depression and Homozygous Regions.绵羊()产羔数:近交衰退和纯合区域。
Genes (Basel). 2021 Jan 18;12(1):109. doi: 10.3390/genes12010109.
10
Clinical data analysis reveals the role of OGR1 (GPR68) in head and neck squamous cancer.临床数据分析揭示了OGR1(GPR68)在头颈部鳞状细胞癌中的作用。
Animal Model Exp Med. 2020 Mar 18;3(1):55-61. doi: 10.1002/ame2.12105. eCollection 2020 Mar.
马精液冷冻保存后精子DNA的胞嘧啶甲基化
Theriogenology. 2016 Sep 15;86(5):1347-52. doi: 10.1016/j.theriogenology.2016.04.077. Epub 2016 May 6.
4
An Acetate-Specific GPCR, FFAR2, Regulates Insulin Secretion.一种乙酸盐特异性G蛋白偶联受体FFAR2调节胰岛素分泌。
Mol Endocrinol. 2015 Jul;29(7):1055-66. doi: 10.1210/me.2015-1007. Epub 2015 Jun 15.
5
Machine learning reveals sex-specific 17β-estradiol-responsive expression patterns in white perch (Morone americana) plasma proteins.机器学习揭示了白鲈(美洲条纹鲈)血浆蛋白中特定性别的17β-雌二醇反应性表达模式。
Proteomics. 2015 Aug;15(15):2678-90. doi: 10.1002/pmic.201400606. Epub 2015 Jun 11.
6
Sperm global DNA methylation level: association with semen parameters and genome integrity.精子整体DNA甲基化水平:与精液参数及基因组完整性的关联
Andrology. 2015 Mar;3(2):235-40. doi: 10.1111/andr.12001. Epub 2015 Mar 6.
7
Genome-wide mapping reveals conservation of promoter DNA methylation following chicken domestication.全基因组图谱揭示了鸡驯化后启动子DNA甲基化的保守性。
Sci Rep. 2015 Mar 4;5:8748. doi: 10.1038/srep08748.
8
Transcriptomics of mRNA and egg quality in farmed fish: Some recent developments and future directions.养殖鱼类mRNA转录组学与鱼卵质量:近期进展与未来方向
Gen Comp Endocrinol. 2015 Sep 15;221:23-30. doi: 10.1016/j.ygcen.2015.02.012. Epub 2015 Feb 26.
9
Transcriptome annotation and marker discovery in white bass (Morone chrysops) and striped bass (Morone saxatilis).白鲈(Morone chrysops)和条纹鲈(Morone saxatilis)的转录组注释与标记发现
Anim Genet. 2014 Dec;45(6):885-7. doi: 10.1111/age.12211. Epub 2014 Aug 26.
10
Genome-wide profiling of sperm DNA methylation in relation to buffalo (Bubalus bubalis) bull fertility.与水牛(Bubalus bubalis)公牛繁殖力相关的精子DNA甲基化全基因组分析。
Theriogenology. 2014 Sep 15;82(5):750-9.e1. doi: 10.1016/j.theriogenology.2014.06.012. Epub 2014 Jun 16.