Suppr超能文献

全基因组分析家族 1 尿苷二磷酸糖基转移酶(UGT),并鉴定小麦(Triticum aestivum L.)中对赤霉病抗性的 UGT 基因。

Genome-wide analysis of family-1 UDP glycosyltransferases (UGT) and identification of UGT genes for FHB resistance in wheat (Triticum aestivum L.).

机构信息

Institute of Food Crops, Jiangsu Academy of Agricultural Sciences / Jiangsu Collaborative Innovation Center for Modern Crop Production, Nanjing, China.

Institute of Biotechnology and Genetic Engineering, The University of Agriculture, Peshawar, Pakistan.

出版信息

BMC Plant Biol. 2018 Apr 19;18(1):67. doi: 10.1186/s12870-018-1286-5.

Abstract

BACKGROUND

Fusarium head blight (FHB), a devastating disease in wheat worldwide, results in yield loses and mycotoxin, such as deoxynivalenol (DON), accumulation in infected grains. DON also facilitates the pathogen colonization and spread of FHB symptoms during disease development. UDP-glycosyltransferase enzymes (UGTs) are known to contribute to detoxification and enhance FHB resistance by glycosylating DON into DON-3-glucoside (D3G) in wheat. However, a comprehensive investigation of wheat (Triticum aestivum) UGT genes is still lacking.

RESULTS

In this study, we carried out a genome-wide analysis of family-1 UDP glycosyltransferases in wheat based on the PSPG conserved box that resulted in the identification of 179 putative UGT genes. The identified genes were clustered into 16 major phylogenetic groups with a lack of phylogenetic group K. The UGT genes were invariably distributed among all the chromosomes of the 3 genomes. At least 10 intron insertion events were found in the UGT sequences, where intron 4 was observed as the most conserved intron. The expression analysis of the wheat UGT genes using both online microarray data and quantitative real-time PCR verification suggested the distinct role of UGT genes in different tissues and developmental stages. The expression of many UGT genes was up-regulated after Fusarium graminearum inoculation, and six of the genes were further verified by RT-qPCR.

CONCLUSION

We identified 179 UGT genes from wheat using the available sequenced wheat genome. This study provides useful insight into the phylogenetic structure, distribution, and expression patterns of family-1 UDP glycosyltransferases in wheat. The results also offer a foundation for future work aimed at elucidating the molecular mechanisms underlying the resistance to FHB and DON accumulation.

摘要

背景

镰刀菌穗腐病(FHB)是一种世界性的小麦毁灭性病害,导致产量损失和真菌毒素(如脱氧雪腐镰刀菌烯醇,DON)在感染谷物中的积累。DON 还促进了病原菌在病害发展过程中对 FHB 症状的定植和传播。UDP-糖基转移酶(UGTs)通过将 DON 糖基化为 DON-3-葡萄糖苷(D3G),已知可有助于解毒并增强小麦对 FHB 的抗性。然而,对小麦(Triticum aestivum)UGT 基因的全面研究仍然缺乏。

结果

在本研究中,我们基于 PSPG 保守框对小麦家族 1 UDP 糖基转移酶进行了全基因组分析,结果鉴定出 179 个推定的 UGT 基因。鉴定出的基因聚类为 16 个主要的系统发育群,缺乏系统发育群 K。UGT 基因普遍分布在三个基因组的所有染色体上。在 UGT 序列中发现了至少 10 个内含子插入事件,其中内含子 4 被观察为最保守的内含子。使用在线微阵列数据和定量实时 PCR 验证对小麦 UGT 基因的表达分析表明,UGT 基因在不同组织和发育阶段发挥着不同的作用。在接种禾谷镰刀菌后,许多 UGT 基因的表达上调,其中 6 个基因通过 RT-qPCR 进一步验证。

结论

我们使用现有的测序小麦基因组从小麦中鉴定出 179 个 UGT 基因。本研究为小麦家族 1 UDP 糖基转移酶的系统发育结构、分布和表达模式提供了有用的见解。研究结果也为阐明对 FHB 和 DON 积累的抗性的分子机制的未来工作奠定了基础。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6386/5909277/34494b79efb3/12870_2018_1286_Fig1_HTML.jpg

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验