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本文引用的文献

1
Ex situ conservation of plant diversity in the world's botanic gardens.世界植物园中的植物多样性就地保护。
Nat Plants. 2017 Oct;3(10):795-802. doi: 10.1038/s41477-017-0019-3. Epub 2017 Sep 25.
2
Contentious relationships in phylogenomic studies can be driven by a handful of genes.系统发育基因组学研究中的争议性关系可能由少数几个基因驱动。
Nat Ecol Evol. 2017 Apr 10;1(5):126. doi: 10.1038/s41559-017-0126.
3
The U.S. Culture Collection Network Responding to the Requirements of the Nagoya Protocol on Access and Benefit Sharing.美国文化收藏网络响应《名古屋遗传资源获取与惠益分享议定书》的要求。
mBio. 2017 Aug 15;8(4):e00982-17. doi: 10.1128/mBio.00982-17.
4
Biological annihilation via the ongoing sixth mass extinction signaled by vertebrate population losses and declines.生物灭绝——通过脊椎动物种群数量的减少和下降来标志着正在进行的第六次大灭绝。
Proc Natl Acad Sci U S A. 2017 Jul 25;114(30):E6089-E6096. doi: 10.1073/pnas.1704949114. Epub 2017 Jul 10.
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Reconstruction and evolutionary history of eutherian chromosomes.真兽类染色体的重建和进化历史。
Proc Natl Acad Sci U S A. 2017 Jul 3;114(27):E5379-E5388. doi: 10.1073/pnas.1702012114. Epub 2017 Jun 19.
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Opinion: Telepresence is a potentially transformative tool for field science.观点:远程呈现技术是野外科学领域一项具有潜在变革性的工具。
Proc Natl Acad Sci U S A. 2017 May 9;114(19):4841-4844. doi: 10.1073/pnas.1703514114.
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Biodiversity redistribution under climate change: Impacts on ecosystems and human well-being.生物多样性在气候变化下的重新分布:对生态系统和人类福祉的影响。
Science. 2017 Mar 31;355(6332). doi: 10.1126/science.aai9214.
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Molecular Population Genetics.分子群体遗传学
Genetics. 2017 Mar;205(3):1003-1035. doi: 10.1534/genetics.116.196493.
9
Sequencing all life captivates biologists.对所有生命进行测序令生物学家着迷。
Science. 2017 Mar 3;355(6328):894-895. doi: 10.1126/science.355.6328.894.
10
The Global Genome Biodiversity Network (GGBN) Data Standard specification.全球基因组生物多样性网络(GGBN)数据标准规范
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地球生物基因组计划:为生命的未来测序生命。

Earth BioGenome Project: Sequencing life for the future of life.

机构信息

Department of Evolution and Ecology, University of California, Davis, CA 95616;

Department of Population Health and Reproduction, School of Veterinary Medicine, University of California, Davis, CA 95616.

出版信息

Proc Natl Acad Sci U S A. 2018 Apr 24;115(17):4325-4333. doi: 10.1073/pnas.1720115115.

DOI:10.1073/pnas.1720115115
PMID:29686065
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC5924910/
Abstract

Increasing our understanding of Earth's biodiversity and responsibly stewarding its resources are among the most crucial scientific and social challenges of the new millennium. These challenges require fundamental new knowledge of the organization, evolution, functions, and interactions among millions of the planet's organisms. Herein, we present a perspective on the Earth BioGenome Project (EBP), a moonshot for biology that aims to sequence, catalog, and characterize the genomes of all of Earth's eukaryotic biodiversity over a period of 10 years. The outcomes of the EBP will inform a broad range of major issues facing humanity, such as the impact of climate change on biodiversity, the conservation of endangered species and ecosystems, and the preservation and enhancement of ecosystem services. We describe hurdles that the project faces, including data-sharing policies that ensure a permanent, freely available resource for future scientific discovery while respecting access and benefit sharing guidelines of the Nagoya Protocol. We also describe scientific and organizational challenges in executing such an ambitious project, and the structure proposed to achieve the project's goals. The far-reaching potential benefits of creating an open digital repository of genomic information for life on Earth can be realized only by a coordinated international effort.

摘要

提高我们对地球生物多样性的认识并负责任地管理其资源,是新千年最重要的科学和社会挑战之一。这些挑战需要对地球上数百万种生物的组织、进化、功能和相互作用有基本的全新认识。在此,我们提出了地球生物基因组计划(Earth BioGenome Project,EBP)的观点,这是生物学领域的一个宏伟目标,旨在在 10 年内对地球所有真核生物多样性的基因组进行测序、编目和特征描述。EBP 的成果将为人类面临的一系列重大问题提供信息,例如气候变化对生物多样性的影响、濒危物种和生态系统的保护以及生态系统服务的保护和增强。我们描述了该项目面临的障碍,包括数据共享政策,这些政策确保了一个永久性的、免费供未来科学发现使用的资源,同时尊重《名古屋议定书》的获取和惠益分享准则。我们还描述了执行如此雄心勃勃的项目所面临的科学和组织挑战,以及为实现项目目标而提出的结构。只有通过协调一致的国际努力,才能实现为地球上的生命创建开放的基因组信息数字知识库这一深远的潜在利益。