• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利：CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法，用中文像聊天一样搜索，搜遍4000万医学文献。AI智能推荐，让科研检索更轻松。

立即免费搜索

文件翻译

保留排版，准确专业，支持PDF/Word/PPT等文件格式，支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述，25分钟生成高质量综述，智能提取关键信息，辅助科研写作。

立即免费体验

加泰罗尼亚地球生物基因组计划倡议：为全球生物多样性基因组学贡献本地数据。

The Catalan initiative for the Earth BioGenome Project: contributing local data to global biodiversity genomics.

作者信息

Corominas Montserrat, Marquès-Bonet Tomàs, Arnedo Miquel A, Bayés Mònica, Belmonte Jordina, Escrivà Hector, Fernández Rosa, Gabaldón Toni, Garnatje Teresa, Germain Josep, Niell Manel, Palero Ferran, Pons Joan, Puigdomènech Pere, Initiative For The Earth BioGenome Project The Catalan, Arroyo Vanesa, Cuevas-Caballé Cristian, Obiol Joan Ferrer, Gut Ivo, Gut Marta, Hidalgo Oriane, Izquierdo-Arànega Guillem, Pérez-Sorribes Laia, Righi Emilio, Riutort Marta, Vallès Joan, Rozas Julio, Alioto Tyler, Guigó Roderic

机构信息

Departament de Genètica, Microbiologia i Estadística, Facultat de Biologia, Universitat de Barcelona (UB), 08028 Barcelona, Catalonia, Spain.

Institut de Biomedicina (IBUB), Universitat de Barcelona (UB), 08028 Barcelona, Catalonia, Spain.

出版信息

NAR Genom Bioinform. 2024 Jul 17;6(3):lqae075. doi: 10.1093/nargab/lqae075. eCollection 2024 Sep.

DOI:10.1093/nargab/lqae075
PMID:39022326
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11252852/
Abstract

The Catalan Initiative for the Earth BioGenome Project (CBP) is an EBP-affiliated project network aimed at sequencing the genome of the >40 000 eukaryotic species estimated to live in the Catalan-speaking territories (Catalan Linguistic Area, CLA). These territories represent a biodiversity hotspot. While covering less than 1% of Europe, they are home to about one fourth of all known European eukaryotic species. These include a high proportion of endemisms, many of which are threatened. This trend is likely to get worse as the effects of global change are expected to be particularly severe across the Mediterranean Basin, particularly in freshwater ecosystems and mountain areas. Following the EBP model, the CBP is a networked organization that has been able to engage many scientific and non-scientific partners. In the pilot phase, the genomes of 52 species are being sequenced. As a case study in biodiversity conservation, we highlight the genome of the Balearic shearwater , sequenced under the CBP umbrella.

摘要

加泰罗尼亚地球生物基因组计划（CBP）倡议是一个与地球生物基因组计划（EBP）相关的项目网络，旨在对估计生活在加泰罗尼亚语地区（加泰罗尼亚语言区，CLA）的4万多种真核生物的基因组进行测序。这些地区是生物多样性热点地区。虽然它们覆盖的面积不到欧洲的1%，但却是所有已知欧洲真核生物物种中约四分之一的家园。其中包括高比例的特有物种，其中许多受到威胁。随着全球变化的影响预计在地中海盆地将尤为严重，特别是在淡水生态系统和山区，这种趋势可能会变得更糟。遵循EBP模式，CBP是一个网络化组织，能够吸引许多科学和非科学合作伙伴。在试点阶段，正在对52个物种的基因组进行测序。作为生物多样性保护的一个案例研究，我们重点介绍了在CBP框架下测序的巴利阿里剪水鹱的基因组。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/906b/11252852/99b7cedf9cbf/lqae075fig5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/906b/11252852/722554fbbed3/lqae075fig1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/906b/11252852/e50ac0ef273e/lqae075fig2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/906b/11252852/28cd1748f09e/lqae075fig3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/906b/11252852/366a97bbbaba/lqae075fig4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/906b/11252852/99b7cedf9cbf/lqae075fig5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/906b/11252852/722554fbbed3/lqae075fig1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/906b/11252852/e50ac0ef273e/lqae075fig2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/906b/11252852/28cd1748f09e/lqae075fig3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/906b/11252852/366a97bbbaba/lqae075fig4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/906b/11252852/99b7cedf9cbf/lqae075fig5.jpg

相似文献

1
The Catalan initiative for the Earth BioGenome Project: contributing local data to global biodiversity genomics.加泰罗尼亚地球生物基因组计划倡议：为全球生物多样性基因组学贡献本地数据。
NAR Genom Bioinform. 2024 Jul 17;6(3):lqae075. doi: 10.1093/nargab/lqae075. eCollection 2024 Sep.
2
Earth BioGenome Project: Sequencing life for the future of life.地球生物基因组计划：为生命的未来测序生命。
Proc Natl Acad Sci U S A. 2018 Apr 24;115(17):4325-4333. doi: 10.1073/pnas.1720115115.
3
Indigenous peoples and local communities as partners in the sequencing of global eukaryotic biodiversity.原住民和当地社区作为全球真核生物多样性测序的合作伙伴。
NPJ Biodivers. 2023;2(1):8. doi: 10.1038/s44185-023-00013-7. Epub 2023 Apr 3.
4
Standards recommendations for the Earth BioGenome Project.地球生物基因组计划标准建议。
Proc Natl Acad Sci U S A. 2022 Jan 25;119(4). doi: 10.1073/pnas.2115639118.
5
The First Genome of the Balearic Shearwater (Puffinus mauretanicus) Provides a Valuable Resource for Conservation Genomics and Sheds Light on Adaptation to a Pelagic lifestyle.巴利阿里剪嘴鸥（Puffinus mauretanicus）的首个基因组为保护基因组学提供了宝贵资源，并揭示了其对远洋生活方式的适应机制。
Genome Biol Evol. 2022 May 3;14(5). doi: 10.1093/gbe/evac067.
6
Earth Biogenome Project: present status and future plans.地球生物基因组计划：现状与未来规划。
Trends Genet. 2022 Aug;38(8):811-820. doi: 10.1016/j.tig.2022.04.008. Epub 2022 May 19.
7
Genomes on a Tree (GoaT): A versatile, scalable search engine for genomic and sequencing project metadata across the eukaryotic tree of life.基因组之树（GoaT）：一种通用、可扩展的搜索引擎，用于搜索真核生物生命之树中的基因组和测序项目元数据。
Wellcome Open Res. 2023 Jan 17;8:24. doi: 10.12688/wellcomeopenres.18658.1. eCollection 2023.
8
The Earth BioGenome project: opportunities and challenges for plant genomics and conservation.地球生物基因组计划：植物基因组学与保护的机遇与挑战。
Plant J. 2020 Apr;102(2):222-229. doi: 10.1111/tpj.14631. Epub 2020 Jan 29.
9
The European Reference Genome Atlas: piloting a decentralised approach to equitable biodiversity genomics.欧洲参考基因组图谱：试行一种分散式的公平生物多样性基因组学方法。
NPJ Biodivers. 2024 Sep 17;3(1):28. doi: 10.1038/s44185-024-00054-6.
10
EBP-Colombia and the bioeconomy: Genomics in the service of biodiversity conservation and sustainable development.EBP-Colombia 与生物经济：基因组学服务于生物多样性保护和可持续发展。
Proc Natl Acad Sci U S A. 2022 Jan 25;119(4). doi: 10.1073/pnas.2115641119.

引用本文的文献

1
The genome sequence of the Violet Copper, (Denis & Schiffermüller, 1775).紫铜弄蝶（丹尼斯和席费尔米勒，1775年）的基因组序列。
F1000Res. 2025 Jan 10;14:60. doi: 10.12688/f1000research.156485.1. eCollection 2025.
2
A widespread metabolic gene cluster family in metazoans.后生动物中广泛存在的代谢基因簇家族。
Nat Chem Biol. 2025 Jun 13. doi: 10.1038/s41589-025-01927-y.
3
Chromosome-level genome assembly and annotation of the sharpsnout seabream (Diplodus puntazzo).尖吻鲈（Diplodus puntazzo）的染色体水平基因组组装与注释

本文引用的文献

1
Chromosome-level assembly and annotation of the Xyrichtys novacula (Linnaeus, 1758) genome.叉尾斗鱼（林奈，1758 年）基因组的染色体水平组装和注释。
DNA Res. 2023 Oct 1;30(5). doi: 10.1093/dnares/dsad021.
2
Genome annotation: From human genetics to biodiversity genomics.基因组注释：从人类遗传学到生物多样性基因组学
Cell Genom. 2023 Aug 1;3(8):100375. doi: 10.1016/j.xgen.2023.100375. eCollection 2023 Aug 9.
3
Biodiversity: an atlas of European reference genomes.生物多样性：欧洲参考基因组图谱
Sci Data. 2025 Apr 4;12(1):576. doi: 10.1038/s41597-025-04902-3.
4
The BioGenome Portal: a web-based platform for biodiversity genomics data management.生物基因组门户：一个用于生物多样性基因组学数据管理的基于网络的平台。
NAR Genom Bioinform. 2025 Mar 22;7(1):lqaf020. doi: 10.1093/nargab/lqaf020. eCollection 2025 Mar.
5
Chromosome-Level Genome Assembly and Annotation of Corallium rubrum: A Mediterranean Coral Threatened by Overharvesting and Climate Change.红珊瑚的染色体水平基因组组装与注释：一种受到过度捕捞和气候变化威胁的地中海珊瑚
Genome Biol Evol. 2025 Feb 3;17(2). doi: 10.1093/gbe/evae253.
6
GENCODE: massively expanding the lncRNA catalog through capture long-read RNA sequencing.GENCODE：通过捕获长读长RNA测序大幅扩充长链非编码RNA目录。
bioRxiv. 2024 Oct 31:2024.10.29.620654. doi: 10.1101/2024.10.29.620654.
7
Taxonomy Identifiers (TaxId) for Biodiversity Genomics: a guide to getting TaxId for submission of data to public databases.生物多样性基因组学的分类标识符（TaxId）：获取用于向公共数据库提交数据的TaxId指南。
Wellcome Open Res. 2024 Oct 15;9:591. doi: 10.12688/wellcomeopenres.22949.1. eCollection 2024.
8
Chromosome-level genome assembly and annotation of the black sea urchin Arbacia lixula (Linnaeus, 1758).黑海参（Linnaeus，1758）染色体水平基因组组装和注释。
DNA Res. 2024 Aug 1;31(4). doi: 10.1093/dnares/dsae020.
Nature. 2023 Jul;619(7969):252. doi: 10.1038/d41586-023-02229-w.
4
Chromosome-level genome assembly of Lilford's wall lizard, Podarcis lilfordi (Günther, 1874) from the Balearic Islands (Spain).巴利阿里群岛（西班牙）丽佛蜥（Podarcis lilfordi）的染色体水平基因组组装。
DNA Res. 2023 Jun 1;30(3). doi: 10.1093/dnares/dsad008.
5
Expanding the molecular and morphological diversity of Apusomonadida, a deep-branching group of gliding bacterivorous protists.扩展动鞭毛门的分子和形态多样性，动鞭毛门是一类滑行的食细菌原生生物的基部类群。
J Eukaryot Microbiol. 2023 Mar;70(2):e12956. doi: 10.1111/jeu.12956. Epub 2022 Dec 13.
6
The First Genome of the Balearic Shearwater (Puffinus mauretanicus) Provides a Valuable Resource for Conservation Genomics and Sheds Light on Adaptation to a Pelagic lifestyle.巴利阿里剪嘴鸥（Puffinus mauretanicus）的首个基因组为保护基因组学提供了宝贵资源，并揭示了其对远洋生活方式的适应机制。
Genome Biol Evol. 2022 May 3;14(5). doi: 10.1093/gbe/evac067.
7
Landscape Genomics to Enable Conservation Actions: The California Conservation Genomics Project.助力保护行动的景观基因组学：加利福尼亚保护基因组学项目
J Hered. 2022 Nov 30;113(6):577-588. doi: 10.1093/jhered/esac020.
8
Africa: sequence 100,000 species to safeguard biodiversity.非洲：对10万种物种进行测序以保护生物多样性。
Nature. 2022 Mar;603(7901):388-392. doi: 10.1038/d41586-022-00712-4.
9
The era of reference genomes in conservation genomics.保护基因组学中的参考基因组时代。
Trends Ecol Evol. 2022 Mar;37(3):197-202. doi: 10.1016/j.tree.2021.11.008. Epub 2022 Jan 24.
10
Sequence locally, think globally: The Darwin Tree of Life Project.就地测序，放眼全球：达尔文生命之树计划。
Proc Natl Acad Sci U S A. 2022 Jan 25;119(4). doi: 10.1073/pnas.2115642118.