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YtfB,一种含有 OapA 结构域的蛋白,是大肠杆菌中的一种新的细胞分裂蛋白。

YtfB, an OapA Domain-Containing Protein, Is a New Cell Division Protein in Escherichia coli.

机构信息

Department of Microbiology and Immunology, University of Arkansas for Medical Sciences, Little Rock, Arkansas, USA

Department of Microbiology and Immunology, University of Arkansas for Medical Sciences, Little Rock, Arkansas, USA.

出版信息

J Bacteriol. 2018 Jun 11;200(13). doi: 10.1128/JB.00046-18. Print 2018 Jul 1.

Abstract

While screening the Pfam database for novel peptidoglycan (PG) binding modules, we identified the OapA domain, which is annotated as a LysM-like domain. LysM domains bind PG and mediate localization to the septal ring. In the Gram-negative bacterium , an OapA domain is present in YtfB, an inner membrane protein of unknown function but whose overproduction causes cells to filament. Together, these observations suggested that YtfB directly affects cell division, most likely through its OapA domain. Here, we show that YtfB accumulates at the septal ring and that its action requires the division-initiating protein FtsZ and, to a lesser extent, ZipA, an early recruit to the septalsome. While the loss of YtfB had no discernible impact, a mutant lacking both YtfB and DedD (a known cell division protein) grew as filamentous cells. The YtfB OapA domain by itself also localized to sites of division, and this localization was enhanced by the presence of denuded PGs. Finally, the OapA domain bound PG, though binding did not depend on the formation of denuded glycans. Collectively, our findings demonstrate that YtfB is a cell division protein whose function is related to cell wall hydrolases. All living cells must divide in order to thrive. In bacteria, this involves the coordinated activities of a large number of proteins that work in concert to constrict the cell. Knowing which proteins contribute to this process and how they function is fundamental. Here, we identify a new member of the cell division apparatus in the Gram-negative bacterium whose function is related to the generation of a transient cell wall structure. These findings deepen our understanding of bacterial cell division.

摘要

在筛选 Pfam 数据库中的新型肽聚糖(PG)结合模块时,我们鉴定出了 OapA 结构域,该结构域被注释为 LysM 样结构域。LysM 结构域结合 PG 并介导其定位于隔膜环。在革兰氏阴性菌中,OapA 结构域存在于 YtfB 中,YtfB 是一种未知功能的内膜蛋白,但过表达会导致细胞成丝状。这些观察结果表明,YtfB 直接影响细胞分裂,最可能是通过其 OapA 结构域。在这里,我们表明 YtfB 在隔膜环处积累,并且其作用需要起始分裂蛋白 FtsZ,并且在较小程度上需要 ZipA,ZipA 是隔膜体的早期招募物。虽然缺失 YtfB 没有明显的影响,但缺失 YtfB 和 DedD(一种已知的细胞分裂蛋白)的突变体则以丝状细胞的形式生长。YtfB 的 OapA 结构域本身也定位于分裂部位,并且这种定位通过裸露 PG 的存在而增强。最后,OapA 结构域结合 PG,尽管结合并不依赖于裸露聚糖的形成。总的来说,我们的发现表明 YtfB 是一种细胞分裂蛋白,其功能与细胞壁水解酶有关。所有活细胞都必须分裂才能茁壮成长。在细菌中,这涉及到大量蛋白质的协调活动,这些蛋白质协同作用以收缩细胞。了解哪些蛋白质有助于这个过程以及它们如何发挥作用是至关重要的。在这里,我们在革兰氏阴性菌中鉴定出细胞分裂装置的一个新成员,其功能与瞬时细胞壁结构的产生有关。这些发现加深了我们对细菌细胞分裂的理解。

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Roles of the DedD Protein in Cell Constriction.DedD 蛋白在细胞缢缩中的作用。
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本文引用的文献

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The bacterial divisome: more than a ring?细菌分裂体:不止是一个环?
Curr Genet. 2017 May;63(2):161-164. doi: 10.1007/s00294-016-0630-2. Epub 2016 Jul 8.

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