Department of Pathology, School of Basic Medical Sciences, Southern Medical University, Guangzhou 510515, China.
Department of Pathology, School of Basic Medical Sciences, Southern Medical University, Guangzhou 510515, China; Department of Pathology, Nanfang Hospital, Southern Medical University, Guangzhou 510515, China.
Biochem Biophys Res Commun. 2018 Jun 18;501(1):113-118. doi: 10.1016/j.bbrc.2018.04.186. Epub 2018 May 3.
Metastasis is a key factor that affects the survival and prognosis of colorectal cancer patients. To elucidate molecular mechanism associated with the metastasis of colorectal cancer, genes related to the metastasis time of colorectal cancer were screened. Then, a network was constructed with this genes. Data was obtained from colorectal cancer expression profile. Molecular mechanism elucidated the time of tumor metastasis and the expression of genes related to colorectal cancer. We found that metastasis-promoting and metastasis-inhibiting networks included protein hubs of high connectivity. These protein hubs were components of organelles. Some ribosomal proteins promoted the metastasis of colorectal cancer. In some components of organelles, such as proteasomes, mitochondrial ribosome, ATP synthase, and splicing factors, the metastasis of colorectal cancer was inhibited by some sections of these organelles. After performing survival analysis of proteins in organelles, joint survival curve of proteins was constructed in ribosomal network. This joint survival curve showed metastasis was promoted in patients with colorectal cancer (P = 0.0022939). Joint survival curve of proteins was plotted against proteasomes (P = 7 e-07), mitochondrial ribosome (P = 0.0001157), ATP synthase (P = 0.0001936), and splicing factors (P = 1.35e-05). These curves indicate that metastasis of colorectal cancer can be inhibited. After analyzing proteins that bind with organelle components, we also found that some proteins were associated with the time of colorectal cancer metastasis. Hence, different cellular components play different roles in the metastasis of colorectal cancer.
转移是影响结直肠癌患者生存和预后的关键因素。为了阐明与结直肠癌转移相关的分子机制,筛选了与结直肠癌转移时间相关的基因。然后,用这些基因构建了一个网络。数据来自结直肠癌表达谱。分子机制阐明了结直肠癌转移的时间和与结直肠癌相关基因的表达。我们发现,促进转移和抑制转移的网络包括高连接蛋白的蛋白枢纽。这些蛋白枢纽是细胞器的组成部分。一些核糖体蛋白促进了结直肠癌的转移。在一些细胞器的组成部分中,如蛋白酶体、线粒体核糖体、ATP 合酶和剪接因子,这些细胞器的某些部分抑制了结直肠癌的转移。对细胞器中蛋白质进行生存分析后,构建了核糖体网络中蛋白质的联合生存曲线。这条联合生存曲线显示结直肠癌患者的转移得到了促进(P=0.0022939)。与蛋白酶体(P=7e-07)、线粒体核糖体(P=0.0001157)、ATP 合酶(P=0.0001936)和剪接因子(P=1.35e-05)的联合生存曲线。这些曲线表明结直肠癌的转移可以被抑制。在分析与细胞器成分结合的蛋白质后,我们还发现一些蛋白质与结直肠癌转移的时间有关。因此,不同的细胞成分在结直肠癌转移中发挥不同的作用。