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大气分子团簇的水合作用:一种用于系统构型采样的新方法。

Hydration of Atmospheric Molecular Clusters: A New Method for Systematic Configurational Sampling.

作者信息

Kildgaard Jens Vive, Mikkelsen Kurt V, Bilde Merete, Elm Jonas

机构信息

Department of Chemistry , University of Copenhagen , Copenhagen , Denmark.

Department of Chemistry and iClimate , Aarhus University , Aarhus , Denmark.

出版信息

J Phys Chem A. 2018 Jun 7;122(22):5026-5036. doi: 10.1021/acs.jpca.8b02758. Epub 2018 May 21.

Abstract

We present a new systematic configurational sampling algorithm for investigating the potential energy surface of hydrated atmospheric molecular clusters. The algorithm is based on creating a Fibonacci sphere around each atom in the cluster and adding water molecules to each point in nine different orientations. For the sampling of water molecules to existing hydrogen bonds, the cluster is displaced along the hydrogen bond, and a water molecule is placed in between in three different orientations. Generated redundant structures are eliminated based on minimizing the root-mean-square distance of different conformers. Initially, the clusters are sampled using the semiempirical PM6 method and subsequently using density functional theory (M06-2X and ωB97X-D) with the 6-31++G(d,p) basis set. Applying the developed algorithm, we study the hydration of sulfuric acid with up to 15 water molecules. We find that the addition of the first four water molecules "saturate" the sulfuric acid molecule and that they are more thermodynamically favorable than the addition of water molecules 5-15. Using the large generated set of conformers, we assess the performance of approximate methods (ωB97X-D, M06-2X, PW91, and PW6B95-D3) in calculating the binding energies and assigning the global minimum conformation compared to high level CCSD(T)-F12a/VDZ-F12 reference calculations. The tested DFT functionals systematically overestimate the binding energies compared to coupled cluster calculations, and we find that this deficiency can be corrected by a simple scaling factor.

摘要

我们提出了一种新的系统构型采样算法,用于研究水合大气分子团簇的势能面。该算法基于在团簇中的每个原子周围创建一个斐波那契球面,并以九种不同取向向每个点添加水分子。对于向现有氢键添加水分子的采样,团簇沿氢键移动,然后将一个水分子以三种不同取向置于其间。通过最小化不同构象异构体的均方根距离来消除生成的冗余结构。最初,使用半经验PM6方法对团簇进行采样,随后使用密度泛函理论(M06 - 2X和ωB97X - D)以及6 - 31++G(d,p)基组。应用所开发的算法,我们研究了硫酸与多达15个水分子的水合作用。我们发现添加的前四个水分子使硫酸分子“饱和”,并且它们在热力学上比添加5 - 15个水分子更有利。利用大量生成的构象异构体集,我们评估了近似方法(ωB97X - D、M06 - 2X、PW91和PW6B95 - D3)在计算结合能以及与高水平CCSD(T)-F12a/VDZ - F12参考计算相比指定全局最小构象方面的性能。与耦合簇计算相比,测试的密度泛函理论系统地高估了结合能,并且我们发现这种不足可以通过一个简单的比例因子来校正。

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